Gene : BPC3 A. thaliana TAIR10
Primary Identifier:  ? AT1G68120 Defline:  (1 of 3) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED
Genomic Order:  5758 Name:  ? AT1G68120
Secondary Identifier:  ? PAC:19655368
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68120 0.5kb upstream 0.5kb upstream 1820 true Chr1: 25526215-25528034 Arabidopsis thaliana
AT1G68120 0.5kb upstream 0.5kb upstream 500 false Chr1: 25527535-25528034 Arabidopsis thaliana
AT1G68120 0.5kb downstream 0.5kb downstream 1820 true Chr1: 25525715-25527534 Arabidopsis thaliana
AT1G68120 0.5kb downstream 0.5kb downstream 500 false Chr1: 25525715-25526214 Arabidopsis thaliana
AT1G68120 1.0kb upstream 1.0kb upstream 2320 true Chr1: 25526215-25528534 Arabidopsis thaliana
AT1G68120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25527535-25528534 Arabidopsis thaliana
AT1G68120 1.0kb downstream 1.0kb downstream 2320 true Chr1: 25525215-25527534 Arabidopsis thaliana
AT1G68120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25525215-25526214 Arabidopsis thaliana
AT1G68120 2.0kb upstream 2.0kb upstream 3320 true Chr1: 25526215-25529534 Arabidopsis thaliana
AT1G68120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25527535-25529534 Arabidopsis thaliana
AT1G68120 2.0kb downstream 2.0kb downstream 3320 true Chr1: 25524215-25527534 Arabidopsis thaliana
AT1G68120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25524215-25526214 Arabidopsis thaliana
AT1G68120 5.0kb upstream 5.0kb upstream 6320 true Chr1: 25526215-25532534 Arabidopsis thaliana
AT1G68120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25527535-25532534 Arabidopsis thaliana
AT1G68120 5.0kb downstream 5.0kb downstream 6320 true Chr1: 25521215-25527534 Arabidopsis thaliana
AT1G68120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25521215-25526214 Arabidopsis thaliana
AT1G68120 10.0kb upstream 10.0kb upstream 11320 true Chr1: 25526215-25537534 Arabidopsis thaliana
AT1G68120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25527535-25537534 Arabidopsis thaliana
AT1G68120 10.0kb downstream 10.0kb downstream 11320 true Chr1: 25516215-25527534 Arabidopsis thaliana
AT1G68120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25516215-25526214 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365798 5261 Brassicaceae View MSA
123799038 5264 Brassicales-Malvales View MSA
124296600 5266 SBM View MSA
124148704 5268 Malvidae View MSA
123874648 5270 Rosid View MSA
123458588 5271 Pentapetalae View MSA
122493992 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.244     Low  
cufflinks 0.366        
cufflinks 0.198     Low  
cufflinks 0.714       High
cufflinks 0.19     Low  
cufflinks 0.301     Low  

0 Strain