Gene : AT1G30170 A. thaliana TAIR10
Defline:  (1 of 34) PTHR31681//PTHR31681:SF3 - FAMILY NOT NAMED // EMB|CAB89038.1-RELATED Genomic Order:  2985
Name:  ? AT1G30170 Secondary Identifier:  ? PAC:19656238
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30170 0.5kb upstream 0.5kb upstream 2231 true Chr1: 10607888-10610118 Arabidopsis thaliana
AT1G30170 0.5kb upstream 0.5kb upstream 500 false Chr1: 10609619-10610118 Arabidopsis thaliana
AT1G30170 0.5kb downstream 0.5kb downstream 2231 true Chr1: 10607388-10609618 Arabidopsis thaliana
AT1G30170 0.5kb downstream 0.5kb downstream 500 false Chr1: 10607388-10607887 Arabidopsis thaliana
AT1G30170 1.0kb upstream 1.0kb upstream 2731 true Chr1: 10607888-10610618 Arabidopsis thaliana
AT1G30170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10609619-10610618 Arabidopsis thaliana
AT1G30170 1.0kb downstream 1.0kb downstream 2731 true Chr1: 10606888-10609618 Arabidopsis thaliana
AT1G30170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10606888-10607887 Arabidopsis thaliana
AT1G30170 2.0kb upstream 2.0kb upstream 3731 true Chr1: 10607888-10611618 Arabidopsis thaliana
AT1G30170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10609619-10611618 Arabidopsis thaliana
AT1G30170 2.0kb downstream 2.0kb downstream 3731 true Chr1: 10605888-10609618 Arabidopsis thaliana
AT1G30170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10605888-10607887 Arabidopsis thaliana
AT1G30170 5.0kb upstream 5.0kb upstream 6731 true Chr1: 10607888-10614618 Arabidopsis thaliana
AT1G30170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10609619-10614618 Arabidopsis thaliana
AT1G30170 5.0kb downstream 5.0kb downstream 6731 true Chr1: 10602888-10609618 Arabidopsis thaliana
AT1G30170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10602888-10607887 Arabidopsis thaliana
AT1G30170 10.0kb upstream 10.0kb upstream 11731 true Chr1: 10607888-10619618 Arabidopsis thaliana
AT1G30170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10609619-10619618 Arabidopsis thaliana
AT1G30170 10.0kb downstream 10.0kb downstream 11731 true Chr1: 10597888-10609618 Arabidopsis thaliana
AT1G30170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10597888-10607887 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372852 5261 Brassicaceae View MSA
123800444 5264 Brassicales-Malvales View MSA
124297857 5266 SBM View MSA
124149643 5268 Malvidae View MSA
123875409 5270 Rosid View MSA
123753146 5271 Pentapetalae View MSA
122797944 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.017     Low  
cufflinks 0.049     Low High
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain