Gene : NRPB8A A. thaliana TAIR10
Primary Identifier:  ? AT1G54250 Defline:  (1 of 2) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H)
Genomic Order:  4480 Name:  ? AT1G54250
Secondary Identifier:  ? PAC:19650656
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G54250 0.5kb upstream 0.5kb upstream 2120 true Chr1: 20254438-20256557 Arabidopsis thaliana
AT1G54250 0.5kb upstream 0.5kb upstream 500 false Chr1: 20254438-20254937 Arabidopsis thaliana
AT1G54250 0.5kb downstream 0.5kb downstream 2120 true Chr1: 20254938-20257057 Arabidopsis thaliana
AT1G54250 0.5kb downstream 0.5kb downstream 500 false Chr1: 20256558-20257057 Arabidopsis thaliana
AT1G54250 1.0kb upstream 1.0kb upstream 2620 true Chr1: 20253938-20256557 Arabidopsis thaliana
AT1G54250 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20253938-20254937 Arabidopsis thaliana
AT1G54250 1.0kb downstream 1.0kb downstream 2620 true Chr1: 20254938-20257557 Arabidopsis thaliana
AT1G54250 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20256558-20257557 Arabidopsis thaliana
AT1G54250 2.0kb upstream 2.0kb upstream 3620 true Chr1: 20252938-20256557 Arabidopsis thaliana
AT1G54250 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20252938-20254937 Arabidopsis thaliana
AT1G54250 2.0kb downstream 2.0kb downstream 3620 true Chr1: 20254938-20258557 Arabidopsis thaliana
AT1G54250 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20256558-20258557 Arabidopsis thaliana
AT1G54250 5.0kb upstream 5.0kb upstream 6620 true Chr1: 20249938-20256557 Arabidopsis thaliana
AT1G54250 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20249938-20254937 Arabidopsis thaliana
AT1G54250 5.0kb downstream 5.0kb downstream 6620 true Chr1: 20254938-20261557 Arabidopsis thaliana
AT1G54250 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20256558-20261557 Arabidopsis thaliana
AT1G54250 10.0kb upstream 10.0kb upstream 11620 true Chr1: 20244938-20256557 Arabidopsis thaliana
AT1G54250 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20244938-20254937 Arabidopsis thaliana
AT1G54250 10.0kb downstream 10.0kb downstream 11620 true Chr1: 20254938-20266557 Arabidopsis thaliana
AT1G54250 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20256558-20266557 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332026 5261 Brassicaceae View MSA
123773144 5264 Brassicales-Malvales View MSA
124346830 5266 SBM View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.438        
cufflinks 10.786       High
cufflinks 7.72        
cufflinks 9.406        
cufflinks 7.468        
cufflinks 8.829        

0 Strain