Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana TRPSYN-PWY | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G25083 0.5kb upstream | 0.5kb | upstream | 2395 | true | Chr1: 8808549-8810943 | Arabidopsis thaliana |
AT1G25083 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 8810444-8810943 | Arabidopsis thaliana |
AT1G25083 0.5kb downstream | 0.5kb | downstream | 2395 | true | Chr1: 8808049-8810443 | Arabidopsis thaliana |
AT1G25083 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 8808049-8808548 | Arabidopsis thaliana |
AT1G25083 1.0kb upstream | 1.0kb | upstream | 2895 | true | Chr1: 8808549-8811443 | Arabidopsis thaliana |
AT1G25083 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 8810444-8811443 | Arabidopsis thaliana |
AT1G25083 1.0kb downstream | 1.0kb | downstream | 2895 | true | Chr1: 8807549-8810443 | Arabidopsis thaliana |
AT1G25083 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 8807549-8808548 | Arabidopsis thaliana |
AT1G25083 2.0kb upstream | 2.0kb | upstream | 3895 | true | Chr1: 8808549-8812443 | Arabidopsis thaliana |
AT1G25083 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 8810444-8812443 | Arabidopsis thaliana |
AT1G25083 2.0kb downstream | 2.0kb | downstream | 3895 | true | Chr1: 8806549-8810443 | Arabidopsis thaliana |
AT1G25083 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 8806549-8808548 | Arabidopsis thaliana |
AT1G25083 5.0kb upstream | 5.0kb | upstream | 6895 | true | Chr1: 8808549-8815443 | Arabidopsis thaliana |
AT1G25083 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 8810444-8815443 | Arabidopsis thaliana |
AT1G25083 5.0kb downstream | 5.0kb | downstream | 6895 | true | Chr1: 8803549-8810443 | Arabidopsis thaliana |
AT1G25083 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 8803549-8808548 | Arabidopsis thaliana |
AT1G25083 10.0kb upstream | 10.0kb | upstream | 11895 | true | Chr1: 8808549-8820443 | Arabidopsis thaliana |
AT1G25083 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 8810444-8820443 | Arabidopsis thaliana |
AT1G25083 10.0kb downstream | 10.0kb | downstream | 11895 | true | Chr1: 8798549-8810443 | Arabidopsis thaliana |
AT1G25083 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 8798549-8808548 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122331611 | 5261 | Brassicaceae | View MSA |
123772772 | 5264 | Brassicales-Malvales | View MSA |
124271279 | 5266 | SBM | View MSA |
124127277 | 5268 | Malvidae | View MSA |
124061259 | 5270 | Rosid | View MSA |
123743994 | 5271 | Pentapetalae | View MSA |
122794235 | 5272 | Eudicot | View MSA |
122041811 | 5273 | Angiosperm | View MSA |
121344905 | 5274 | Embryophyte | View MSA |
123424838 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.008 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.014 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |