Gene : AT1G29250 A. thaliana TAIR10
Defline:  (1 of 6) PF01918 - Alba (Alba) Genomic Order:  2888
Name:  ? AT1G29250 Secondary Identifier:  ? PAC:19658162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29250 0.5kb upstream 0.5kb upstream 1962 true Chr1: 10223266-10225227 Arabidopsis thaliana
AT1G29250 0.5kb upstream 0.5kb upstream 500 false Chr1: 10224728-10225227 Arabidopsis thaliana
AT1G29250 0.5kb downstream 0.5kb downstream 1962 true Chr1: 10222766-10224727 Arabidopsis thaliana
AT1G29250 0.5kb downstream 0.5kb downstream 500 false Chr1: 10222766-10223265 Arabidopsis thaliana
AT1G29250 1.0kb upstream 1.0kb upstream 2462 true Chr1: 10223266-10225727 Arabidopsis thaliana
AT1G29250 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10224728-10225727 Arabidopsis thaliana
AT1G29250 1.0kb downstream 1.0kb downstream 2462 true Chr1: 10222266-10224727 Arabidopsis thaliana
AT1G29250 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10222266-10223265 Arabidopsis thaliana
AT1G29250 2.0kb upstream 2.0kb upstream 3462 true Chr1: 10223266-10226727 Arabidopsis thaliana
AT1G29250 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10224728-10226727 Arabidopsis thaliana
AT1G29250 2.0kb downstream 2.0kb downstream 3462 true Chr1: 10221266-10224727 Arabidopsis thaliana
AT1G29250 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10221266-10223265 Arabidopsis thaliana
AT1G29250 5.0kb upstream 5.0kb upstream 6462 true Chr1: 10223266-10229727 Arabidopsis thaliana
AT1G29250 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10224728-10229727 Arabidopsis thaliana
AT1G29250 5.0kb downstream 5.0kb downstream 6462 true Chr1: 10218266-10224727 Arabidopsis thaliana
AT1G29250 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10218266-10223265 Arabidopsis thaliana
AT1G29250 10.0kb upstream 10.0kb upstream 11462 true Chr1: 10223266-10234727 Arabidopsis thaliana
AT1G29250 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10224728-10234727 Arabidopsis thaliana
AT1G29250 10.0kb downstream 10.0kb downstream 11462 true Chr1: 10213266-10224727 Arabidopsis thaliana
AT1G29250 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10213266-10223265 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377148 5261 Brassicaceae View MSA
123836105 5264 Brassicales-Malvales View MSA
124345416 5266 SBM View MSA
124246125 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.381        
cufflinks 18.809        
cufflinks 14.487        
cufflinks 19.512        
cufflinks 11.48       Low
cufflinks 23.411       High

0 Strain