Gene : AT1G34030 A. thaliana TAIR10
Defline:  (1 of 3) K02964 - small subunit ribosomal protein S18e (RP-S18e, RPS18) Genomic Order:  3356
Name:  ? AT1G34030 Secondary Identifier:  ? PAC:19656922
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34030 0.5kb upstream 0.5kb upstream 1989 true Chr1: 12370065-12372053 Arabidopsis thaliana
AT1G34030 0.5kb upstream 0.5kb upstream 500 false Chr1: 12371554-12372053 Arabidopsis thaliana
AT1G34030 0.5kb downstream 0.5kb downstream 1989 true Chr1: 12369565-12371553 Arabidopsis thaliana
AT1G34030 0.5kb downstream 0.5kb downstream 500 false Chr1: 12369565-12370064 Arabidopsis thaliana
AT1G34030 1.0kb upstream 1.0kb upstream 2489 true Chr1: 12370065-12372553 Arabidopsis thaliana
AT1G34030 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12371554-12372553 Arabidopsis thaliana
AT1G34030 1.0kb downstream 1.0kb downstream 2489 true Chr1: 12369065-12371553 Arabidopsis thaliana
AT1G34030 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12369065-12370064 Arabidopsis thaliana
AT1G34030 2.0kb upstream 2.0kb upstream 3489 true Chr1: 12370065-12373553 Arabidopsis thaliana
AT1G34030 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12371554-12373553 Arabidopsis thaliana
AT1G34030 2.0kb downstream 2.0kb downstream 3489 true Chr1: 12368065-12371553 Arabidopsis thaliana
AT1G34030 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12368065-12370064 Arabidopsis thaliana
AT1G34030 5.0kb upstream 5.0kb upstream 6489 true Chr1: 12370065-12376553 Arabidopsis thaliana
AT1G34030 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12371554-12376553 Arabidopsis thaliana
AT1G34030 5.0kb downstream 5.0kb downstream 6489 true Chr1: 12365065-12371553 Arabidopsis thaliana
AT1G34030 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12365065-12370064 Arabidopsis thaliana
AT1G34030 10.0kb upstream 10.0kb upstream 11489 true Chr1: 12370065-12381553 Arabidopsis thaliana
AT1G34030 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12371554-12381553 Arabidopsis thaliana
AT1G34030 10.0kb downstream 10.0kb downstream 11489 true Chr1: 12360065-12371553 Arabidopsis thaliana
AT1G34030 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12360065-12370064 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376535 5261 Brassicaceae View MSA
123841157 5264 Brassicales-Malvales View MSA
124344283 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.709     High  
cufflinks 94.994     High  
cufflinks 77.166     High  
cufflinks 98.908     High  
cufflinks 62.025     High Low
cufflinks 108.014     High High

0 Strain