Gene : AT1G12630 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED Genomic Order:  1249
Name:  ? AT1G12630 Secondary Identifier:  ? PAC:19654358
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12630 0.5kb upstream 0.5kb upstream 1087 true Chr1: 4298389-4299475 Arabidopsis thaliana
AT1G12630 0.5kb upstream 0.5kb upstream 500 false Chr1: 4298389-4298888 Arabidopsis thaliana
AT1G12630 0.5kb downstream 0.5kb downstream 1087 true Chr1: 4298889-4299975 Arabidopsis thaliana
AT1G12630 0.5kb downstream 0.5kb downstream 500 false Chr1: 4299476-4299975 Arabidopsis thaliana
AT1G12630 1.0kb upstream 1.0kb upstream 1587 true Chr1: 4297889-4299475 Arabidopsis thaliana
AT1G12630 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4297889-4298888 Arabidopsis thaliana
AT1G12630 1.0kb downstream 1.0kb downstream 1587 true Chr1: 4298889-4300475 Arabidopsis thaliana
AT1G12630 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4299476-4300475 Arabidopsis thaliana
AT1G12630 2.0kb upstream 2.0kb upstream 2587 true Chr1: 4296889-4299475 Arabidopsis thaliana
AT1G12630 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4296889-4298888 Arabidopsis thaliana
AT1G12630 2.0kb downstream 2.0kb downstream 2587 true Chr1: 4298889-4301475 Arabidopsis thaliana
AT1G12630 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4299476-4301475 Arabidopsis thaliana
AT1G12630 5.0kb upstream 5.0kb upstream 5587 true Chr1: 4293889-4299475 Arabidopsis thaliana
AT1G12630 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4293889-4298888 Arabidopsis thaliana
AT1G12630 5.0kb downstream 5.0kb downstream 5587 true Chr1: 4298889-4304475 Arabidopsis thaliana
AT1G12630 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4299476-4304475 Arabidopsis thaliana
AT1G12630 10.0kb upstream 10.0kb upstream 10587 true Chr1: 4288889-4299475 Arabidopsis thaliana
AT1G12630 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4288889-4298888 Arabidopsis thaliana
AT1G12630 10.0kb downstream 10.0kb downstream 10587 true Chr1: 4298889-4309475 Arabidopsis thaliana
AT1G12630 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4299476-4309475 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367339 5261 Brassicaceae View MSA
123841266 5264 Brassicales-Malvales View MSA
124351280 5266 SBM View MSA
124251299 5268 Malvidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378       Low
cufflinks 7.862       High
cufflinks 0.581        
cufflinks 3.795        
cufflinks 0.707        
cufflinks 8.813       High

0 Strain