Gene : AT1G80530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21576//PTHR21576:SF41 - UNCHARACTERIZED NODULIN-LIKE PROTEIN // MAJOR FACILITATOR SUPERFAMILY PROTEIN Genomic Order:  7029
Name:  ? AT1G80530 Secondary Identifier:  ? PAC:19657241
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80530 0.5kb upstream 0.5kb upstream 2873 true Chr1: 30277952-30280824 Arabidopsis thaliana
AT1G80530 0.5kb upstream 0.5kb upstream 500 false Chr1: 30280325-30280824 Arabidopsis thaliana
AT1G80530 0.5kb downstream 0.5kb downstream 2873 true Chr1: 30277452-30280324 Arabidopsis thaliana
AT1G80530 0.5kb downstream 0.5kb downstream 500 false Chr1: 30277452-30277951 Arabidopsis thaliana
AT1G80530 1.0kb upstream 1.0kb upstream 3373 true Chr1: 30277952-30281324 Arabidopsis thaliana
AT1G80530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30280325-30281324 Arabidopsis thaliana
AT1G80530 1.0kb downstream 1.0kb downstream 3373 true Chr1: 30276952-30280324 Arabidopsis thaliana
AT1G80530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30276952-30277951 Arabidopsis thaliana
AT1G80530 2.0kb upstream 2.0kb upstream 4373 true Chr1: 30277952-30282324 Arabidopsis thaliana
AT1G80530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30280325-30282324 Arabidopsis thaliana
AT1G80530 2.0kb downstream 2.0kb downstream 4373 true Chr1: 30275952-30280324 Arabidopsis thaliana
AT1G80530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30275952-30277951 Arabidopsis thaliana
AT1G80530 5.0kb upstream 5.0kb upstream 7373 true Chr1: 30277952-30285324 Arabidopsis thaliana
AT1G80530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30280325-30285324 Arabidopsis thaliana
AT1G80530 5.0kb downstream 5.0kb downstream 7373 true Chr1: 30272952-30280324 Arabidopsis thaliana
AT1G80530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30272952-30277951 Arabidopsis thaliana
AT1G80530 10.0kb upstream 10.0kb upstream 12373 true Chr1: 30277952-30290324 Arabidopsis thaliana
AT1G80530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30280325-30290324 Arabidopsis thaliana
AT1G80530 10.0kb downstream 10.0kb downstream 12373 true Chr1: 30267952-30280324 Arabidopsis thaliana
AT1G80530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30267952-30277951 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367178 5261 Brassicaceae View MSA
123836592 5264 Brassicales-Malvales View MSA
124345083 5266 SBM View MSA
124246515 5268 Malvidae View MSA
124069729 5270 Rosid View MSA
123751123 5271 Pentapetalae View MSA
122793849 5272 Eudicot View MSA
122041532 5273 Angiosperm View MSA
123429121 5275 Viridiplantae View MSA
121350679 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.22        
cufflinks 37.496     High High
cufflinks 10.31       Low
cufflinks 38.015     High High
cufflinks 11.303        
cufflinks 30.339     High  

0 Strain