Gene : AT1G80280 A. thaliana TAIR10
Defline:  (1 of 1) 3.7.1.13 - 2-hydroxy-6-oxo-6-(2-aminophenyl)hexa-2,4-dienoate hydrolase Genomic Order:  7005
Name:  ? AT1G80280 Secondary Identifier:  ? PAC:19656104
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80280 0.5kb upstream 0.5kb upstream 3546 true Chr1: 30183541-30187086 Arabidopsis thaliana
AT1G80280 0.5kb upstream 0.5kb upstream 500 false Chr1: 30186587-30187086 Arabidopsis thaliana
AT1G80280 0.5kb downstream 0.5kb downstream 3546 true Chr1: 30183041-30186586 Arabidopsis thaliana
AT1G80280 0.5kb downstream 0.5kb downstream 500 false Chr1: 30183041-30183540 Arabidopsis thaliana
AT1G80280 1.0kb upstream 1.0kb upstream 4046 true Chr1: 30183541-30187586 Arabidopsis thaliana
AT1G80280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30186587-30187586 Arabidopsis thaliana
AT1G80280 1.0kb downstream 1.0kb downstream 4046 true Chr1: 30182541-30186586 Arabidopsis thaliana
AT1G80280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30182541-30183540 Arabidopsis thaliana
AT1G80280 2.0kb upstream 2.0kb upstream 5046 true Chr1: 30183541-30188586 Arabidopsis thaliana
AT1G80280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30186587-30188586 Arabidopsis thaliana
AT1G80280 2.0kb downstream 2.0kb downstream 5046 true Chr1: 30181541-30186586 Arabidopsis thaliana
AT1G80280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30181541-30183540 Arabidopsis thaliana
AT1G80280 5.0kb upstream 5.0kb upstream 8046 true Chr1: 30183541-30191586 Arabidopsis thaliana
AT1G80280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30186587-30191586 Arabidopsis thaliana
AT1G80280 5.0kb downstream 5.0kb downstream 8046 true Chr1: 30178541-30186586 Arabidopsis thaliana
AT1G80280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30178541-30183540 Arabidopsis thaliana
AT1G80280 10.0kb upstream 10.0kb upstream 13046 true Chr1: 30183541-30196586 Arabidopsis thaliana
AT1G80280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30186587-30196586 Arabidopsis thaliana
AT1G80280 10.0kb downstream 10.0kb downstream 13046 true Chr1: 30173541-30186586 Arabidopsis thaliana
AT1G80280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30173541-30183540 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365006 5261 Brassicaceae View MSA
123837724 5264 Brassicales-Malvales View MSA
124339856 5266 SBM View MSA
124253798 5268 Malvidae View MSA
124065510 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.569       High
cufflinks 9.01        
cufflinks 4.291        
cufflinks 7.617        
cufflinks 2.942       Low
cufflinks 9.996        

0 Strain