Gene : AT1G80210 A. thaliana TAIR10
Defline:  (1 of 2) K11864 - BRCA1/BRCA2-containing complex subunit 3 (BRCC3) Genomic Order:  6998
Name:  ? AT1G80210 Secondary Identifier:  ? PAC:19652208
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80210 0.5kb upstream 0.5kb upstream 3421 true Chr1: 30162835-30166255 Arabidopsis thaliana
AT1G80210 0.5kb upstream 0.5kb upstream 500 false Chr1: 30165756-30166255 Arabidopsis thaliana
AT1G80210 0.5kb downstream 0.5kb downstream 3421 true Chr1: 30162335-30165755 Arabidopsis thaliana
AT1G80210 0.5kb downstream 0.5kb downstream 500 false Chr1: 30162335-30162834 Arabidopsis thaliana
AT1G80210 1.0kb upstream 1.0kb upstream 3921 true Chr1: 30162835-30166755 Arabidopsis thaliana
AT1G80210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30165756-30166755 Arabidopsis thaliana
AT1G80210 1.0kb downstream 1.0kb downstream 3921 true Chr1: 30161835-30165755 Arabidopsis thaliana
AT1G80210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30161835-30162834 Arabidopsis thaliana
AT1G80210 2.0kb upstream 2.0kb upstream 4921 true Chr1: 30162835-30167755 Arabidopsis thaliana
AT1G80210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30165756-30167755 Arabidopsis thaliana
AT1G80210 2.0kb downstream 2.0kb downstream 4921 true Chr1: 30160835-30165755 Arabidopsis thaliana
AT1G80210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30160835-30162834 Arabidopsis thaliana
AT1G80210 5.0kb upstream 5.0kb upstream 7921 true Chr1: 30162835-30170755 Arabidopsis thaliana
AT1G80210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30165756-30170755 Arabidopsis thaliana
AT1G80210 5.0kb downstream 5.0kb downstream 7921 true Chr1: 30157835-30165755 Arabidopsis thaliana
AT1G80210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30157835-30162834 Arabidopsis thaliana
AT1G80210 10.0kb upstream 10.0kb upstream 12921 true Chr1: 30162835-30175755 Arabidopsis thaliana
AT1G80210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30165756-30175755 Arabidopsis thaliana
AT1G80210 10.0kb downstream 10.0kb downstream 12921 true Chr1: 30152835-30165755 Arabidopsis thaliana
AT1G80210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30152835-30162834 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364742 5261 Brassicaceae View MSA
123831674 5264 Brassicales-Malvales View MSA
124339487 5266 SBM View MSA
124248094 5268 Malvidae View MSA
124064840 5270 Rosid View MSA
123741552 5271 Pentapetalae View MSA
122788768 5272 Eudicot View MSA
122043403 5273 Angiosperm View MSA
121344026 5274 Embryophyte View MSA
123428720 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.489        
cufflinks 4.026        
cufflinks 3.525        
cufflinks 4.234       High
cufflinks 3.69        
cufflinks 3.636        

0 Strain