Gene : AT1G80120 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31087:SF2 - PROTEIN LURP-ONE-RELATED 12-RELATED Genomic Order:  6988
Name:  ? AT1G80120 Secondary Identifier:  ? PAC:19655060
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80120 0.5kb upstream 0.5kb upstream 1604 true Chr1: 30138601-30140204 Arabidopsis thaliana
AT1G80120 0.5kb upstream 0.5kb upstream 500 false Chr1: 30138601-30139100 Arabidopsis thaliana
AT1G80120 0.5kb downstream 0.5kb downstream 1604 true Chr1: 30139101-30140704 Arabidopsis thaliana
AT1G80120 0.5kb downstream 0.5kb downstream 500 false Chr1: 30140205-30140704 Arabidopsis thaliana
AT1G80120 1.0kb upstream 1.0kb upstream 2104 true Chr1: 30138101-30140204 Arabidopsis thaliana
AT1G80120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30138101-30139100 Arabidopsis thaliana
AT1G80120 1.0kb downstream 1.0kb downstream 2104 true Chr1: 30139101-30141204 Arabidopsis thaliana
AT1G80120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30140205-30141204 Arabidopsis thaliana
AT1G80120 2.0kb upstream 2.0kb upstream 3104 true Chr1: 30137101-30140204 Arabidopsis thaliana
AT1G80120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30137101-30139100 Arabidopsis thaliana
AT1G80120 2.0kb downstream 2.0kb downstream 3104 true Chr1: 30139101-30142204 Arabidopsis thaliana
AT1G80120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30140205-30142204 Arabidopsis thaliana
AT1G80120 5.0kb upstream 5.0kb upstream 6104 true Chr1: 30134101-30140204 Arabidopsis thaliana
AT1G80120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30134101-30139100 Arabidopsis thaliana
AT1G80120 5.0kb downstream 5.0kb downstream 6104 true Chr1: 30139101-30145204 Arabidopsis thaliana
AT1G80120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30140205-30145204 Arabidopsis thaliana
AT1G80120 10.0kb upstream 10.0kb upstream 11104 true Chr1: 30129101-30140204 Arabidopsis thaliana
AT1G80120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30129101-30139100 Arabidopsis thaliana
AT1G80120 10.0kb downstream 10.0kb downstream 11104 true Chr1: 30139101-30150204 Arabidopsis thaliana
AT1G80120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30140205-30150204 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029085 5273 Angiosperm View MSA
122370954 5261 Brassicaceae View MSA
123838742 5264 Brassicales-Malvales View MSA
124346378 5266 SBM View MSA
124239150 5268 Malvidae View MSA
124061618 5270 Rosid View MSA
123737880 5271 Pentapetalae View MSA
122787855 5272 Eudicot View MSA
121298484 5274 Embryophyte View MSA
123336456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.38       Low
cufflinks 13.432        
cufflinks 24.01        
cufflinks 15.708        
cufflinks 15.357        
cufflinks 30.245     High High

0 Strain