Gene : AT1G10790 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33826:SF4 - F20B24.21 Genomic Order:  1051
Name:  ? AT1G10790 Secondary Identifier:  ? PAC:19651952
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10790 0.5kb upstream 0.5kb upstream 1988 true Chr1: 3595860-3597847 Arabidopsis thaliana
AT1G10790 0.5kb upstream 0.5kb upstream 500 false Chr1: 3595860-3596359 Arabidopsis thaliana
AT1G10790 0.5kb downstream 0.5kb downstream 1988 true Chr1: 3596360-3598347 Arabidopsis thaliana
AT1G10790 0.5kb downstream 0.5kb downstream 500 false Chr1: 3597848-3598347 Arabidopsis thaliana
AT1G10790 1.0kb upstream 1.0kb upstream 2488 true Chr1: 3595360-3597847 Arabidopsis thaliana
AT1G10790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3595360-3596359 Arabidopsis thaliana
AT1G10790 1.0kb downstream 1.0kb downstream 2488 true Chr1: 3596360-3598847 Arabidopsis thaliana
AT1G10790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3597848-3598847 Arabidopsis thaliana
AT1G10790 2.0kb upstream 2.0kb upstream 3488 true Chr1: 3594360-3597847 Arabidopsis thaliana
AT1G10790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3594360-3596359 Arabidopsis thaliana
AT1G10790 2.0kb downstream 2.0kb downstream 3488 true Chr1: 3596360-3599847 Arabidopsis thaliana
AT1G10790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3597848-3599847 Arabidopsis thaliana
AT1G10790 5.0kb upstream 5.0kb upstream 6488 true Chr1: 3591360-3597847 Arabidopsis thaliana
AT1G10790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3591360-3596359 Arabidopsis thaliana
AT1G10790 5.0kb downstream 5.0kb downstream 6488 true Chr1: 3596360-3602847 Arabidopsis thaliana
AT1G10790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3597848-3602847 Arabidopsis thaliana
AT1G10790 10.0kb upstream 10.0kb upstream 11488 true Chr1: 3586360-3597847 Arabidopsis thaliana
AT1G10790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3586360-3596359 Arabidopsis thaliana
AT1G10790 10.0kb downstream 10.0kb downstream 11488 true Chr1: 3596360-3607847 Arabidopsis thaliana
AT1G10790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3597848-3607847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365517 5261 Brassicaceae View MSA
123798971 5264 Brassicales-Malvales View MSA
124296543 5266 SBM View MSA
124245174 5268 Malvidae View MSA
124070733 5270 Rosid View MSA
123746865 5271 Pentapetalae View MSA
122795000 5272 Eudicot View MSA
122048819 5273 Angiosperm View MSA
121311126 5274 Embryophyte View MSA
123348467 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.137     Low  
cufflinks 0.437        
cufflinks 0.056     Low Low
cufflinks 0.574        
cufflinks 0.077     Low  
cufflinks 0.879       High

0 Strain