Gene : AT1G10650 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10044:SF108 - S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED Genomic Order:  1032
Name:  ? AT1G10650 Secondary Identifier:  ? PAC:19651415
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10650 0.5kb upstream 0.5kb upstream 2829 true Chr1: 3524018-3526846 Arabidopsis thaliana
AT1G10650 0.5kb upstream 0.5kb upstream 500 false Chr1: 3526347-3526846 Arabidopsis thaliana
AT1G10650 0.5kb downstream 0.5kb downstream 2829 true Chr1: 3523518-3526346 Arabidopsis thaliana
AT1G10650 0.5kb downstream 0.5kb downstream 500 false Chr1: 3523518-3524017 Arabidopsis thaliana
AT1G10650 1.0kb upstream 1.0kb upstream 3329 true Chr1: 3524018-3527346 Arabidopsis thaliana
AT1G10650 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3526347-3527346 Arabidopsis thaliana
AT1G10650 1.0kb downstream 1.0kb downstream 3329 true Chr1: 3523018-3526346 Arabidopsis thaliana
AT1G10650 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3523018-3524017 Arabidopsis thaliana
AT1G10650 2.0kb upstream 2.0kb upstream 4329 true Chr1: 3524018-3528346 Arabidopsis thaliana
AT1G10650 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3526347-3528346 Arabidopsis thaliana
AT1G10650 2.0kb downstream 2.0kb downstream 4329 true Chr1: 3522018-3526346 Arabidopsis thaliana
AT1G10650 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3522018-3524017 Arabidopsis thaliana
AT1G10650 5.0kb upstream 5.0kb upstream 7329 true Chr1: 3524018-3531346 Arabidopsis thaliana
AT1G10650 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3526347-3531346 Arabidopsis thaliana
AT1G10650 5.0kb downstream 5.0kb downstream 7329 true Chr1: 3519018-3526346 Arabidopsis thaliana
AT1G10650 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3519018-3524017 Arabidopsis thaliana
AT1G10650 10.0kb upstream 10.0kb upstream 12329 true Chr1: 3524018-3536346 Arabidopsis thaliana
AT1G10650 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3526347-3536346 Arabidopsis thaliana
AT1G10650 10.0kb downstream 10.0kb downstream 12329 true Chr1: 3514018-3526346 Arabidopsis thaliana
AT1G10650 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3514018-3524017 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371106 5261 Brassicaceae View MSA
123833106 5264 Brassicales-Malvales View MSA
124346160 5266 SBM View MSA
124252139 5268 Malvidae View MSA
124071738 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.523        
cufflinks 6.974        
cufflinks 1.889        
cufflinks 5.77        
cufflinks 1.554       Low
cufflinks 7.746       High

0 Strain