Gene : AT1G10417 A. thaliana TAIR10
Genomic Order:  1005 Name:  ? AT1G10417
Secondary Identifier:  ? PAC:19656562
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10417 0.5kb upstream 0.5kb upstream 3772 true Chr1: 3424186-3427957 Arabidopsis thaliana
AT1G10417 0.5kb upstream 0.5kb upstream 500 false Chr1: 3427458-3427957 Arabidopsis thaliana
AT1G10417 0.5kb downstream 0.5kb downstream 3772 true Chr1: 3423686-3427457 Arabidopsis thaliana
AT1G10417 0.5kb downstream 0.5kb downstream 500 false Chr1: 3423686-3424185 Arabidopsis thaliana
AT1G10417 1.0kb upstream 1.0kb upstream 4272 true Chr1: 3424186-3428457 Arabidopsis thaliana
AT1G10417 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3427458-3428457 Arabidopsis thaliana
AT1G10417 1.0kb downstream 1.0kb downstream 4272 true Chr1: 3423186-3427457 Arabidopsis thaliana
AT1G10417 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3423186-3424185 Arabidopsis thaliana
AT1G10417 2.0kb upstream 2.0kb upstream 5272 true Chr1: 3424186-3429457 Arabidopsis thaliana
AT1G10417 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3427458-3429457 Arabidopsis thaliana
AT1G10417 2.0kb downstream 2.0kb downstream 5272 true Chr1: 3422186-3427457 Arabidopsis thaliana
AT1G10417 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3422186-3424185 Arabidopsis thaliana
AT1G10417 5.0kb upstream 5.0kb upstream 8272 true Chr1: 3424186-3432457 Arabidopsis thaliana
AT1G10417 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3427458-3432457 Arabidopsis thaliana
AT1G10417 5.0kb downstream 5.0kb downstream 8272 true Chr1: 3419186-3427457 Arabidopsis thaliana
AT1G10417 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3419186-3424185 Arabidopsis thaliana
AT1G10417 10.0kb upstream 10.0kb upstream 13272 true Chr1: 3424186-3437457 Arabidopsis thaliana
AT1G10417 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3427458-3437457 Arabidopsis thaliana
AT1G10417 10.0kb downstream 10.0kb downstream 13272 true Chr1: 3414186-3427457 Arabidopsis thaliana
AT1G10417 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3414186-3424185 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027878 5273 Angiosperm View MSA
122328943 5261 Brassicaceae Singleton cluster - no MSA
123770268 5264 Brassicales-Malvales Singleton cluster - no MSA
124268810 5266 SBM Singleton cluster - no MSA
124248095 5268 Malvidae View MSA
124037163 5270 Rosid View MSA
123745151 5271 Pentapetalae View MSA
122785717 5272 Eudicot View MSA
121297463 5274 Embryophyte View MSA
123335519 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.866        
cufflinks 2.516       High
cufflinks 0.437       Low
cufflinks 1.742        
cufflinks 0.458       Low
cufflinks 1.775        

0 Strain