Gene : AT1G09870 A. thaliana TAIR10
Defline:  (1 of 1) 3.1.3.8 - 3-phytase / Phytate 6-phosphatase Genomic Order:  948
Name:  ? AT1G09870 Secondary Identifier:  ? PAC:19652361
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4781 Arabidopsis thaliana pathologic  
Athaliana PWY-6358 Arabidopsis thaliana pathologic  
Athaliana PWY-6364 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09870 0.5kb upstream 0.5kb upstream 3358 true Chr1: 3205241-3208598 Arabidopsis thaliana
AT1G09870 0.5kb upstream 0.5kb upstream 500 false Chr1: 3205241-3205740 Arabidopsis thaliana
AT1G09870 0.5kb downstream 0.5kb downstream 3358 true Chr1: 3205741-3209098 Arabidopsis thaliana
AT1G09870 0.5kb downstream 0.5kb downstream 500 false Chr1: 3208599-3209098 Arabidopsis thaliana
AT1G09870 1.0kb upstream 1.0kb upstream 3858 true Chr1: 3204741-3208598 Arabidopsis thaliana
AT1G09870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3204741-3205740 Arabidopsis thaliana
AT1G09870 1.0kb downstream 1.0kb downstream 3858 true Chr1: 3205741-3209598 Arabidopsis thaliana
AT1G09870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3208599-3209598 Arabidopsis thaliana
AT1G09870 2.0kb upstream 2.0kb upstream 4858 true Chr1: 3203741-3208598 Arabidopsis thaliana
AT1G09870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3203741-3205740 Arabidopsis thaliana
AT1G09870 2.0kb downstream 2.0kb downstream 4858 true Chr1: 3205741-3210598 Arabidopsis thaliana
AT1G09870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3208599-3210598 Arabidopsis thaliana
AT1G09870 5.0kb upstream 5.0kb upstream 7858 true Chr1: 3200741-3208598 Arabidopsis thaliana
AT1G09870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3200741-3205740 Arabidopsis thaliana
AT1G09870 5.0kb downstream 5.0kb downstream 7858 true Chr1: 3205741-3213598 Arabidopsis thaliana
AT1G09870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3208599-3213598 Arabidopsis thaliana
AT1G09870 10.0kb upstream 10.0kb upstream 12858 true Chr1: 3195741-3208598 Arabidopsis thaliana
AT1G09870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3195741-3205740 Arabidopsis thaliana
AT1G09870 10.0kb downstream 10.0kb downstream 12858 true Chr1: 3205741-3218598 Arabidopsis thaliana
AT1G09870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3208599-3218598 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362217 5261 Brassicaceae View MSA
123839852 5264 Brassicales-Malvales View MSA
124339036 5266 SBM View MSA
124237919 5268 Malvidae View MSA
124062441 5270 Rosid View MSA
123738595 5271 Pentapetalae View MSA
122785710 5272 Eudicot View MSA
122046100 5273 Angiosperm View MSA
121344587 5274 Embryophyte View MSA
123425669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.758        
cufflinks 17.704        
cufflinks 10.819       Low
cufflinks 18.625        
cufflinks 12.005        
cufflinks 18.403        

0 Strain