Gene : ATP-PRT2 A. thaliana TAIR10

Primary Identifier:  ? AT1G09795 Defline:  (1 of 2) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase
Genomic Order:  938 Name:  ? AT1G09795
Secondary Identifier:  ? PAC:19649444

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana HISTSYN-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09795 0.5kb upstream 0.5kb upstream 3877 true Chr1: 3173034-3176910 Arabidopsis thaliana
AT1G09795 0.5kb upstream 0.5kb upstream 500 false Chr1: 3173034-3173533 Arabidopsis thaliana
AT1G09795 0.5kb downstream 0.5kb downstream 3877 true Chr1: 3173534-3177410 Arabidopsis thaliana
AT1G09795 0.5kb downstream 0.5kb downstream 500 false Chr1: 3176911-3177410 Arabidopsis thaliana
AT1G09795 1.0kb upstream 1.0kb upstream 4377 true Chr1: 3172534-3176910 Arabidopsis thaliana
AT1G09795 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3172534-3173533 Arabidopsis thaliana
AT1G09795 1.0kb downstream 1.0kb downstream 4377 true Chr1: 3173534-3177910 Arabidopsis thaliana
AT1G09795 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3176911-3177910 Arabidopsis thaliana
AT1G09795 2.0kb upstream 2.0kb upstream 5377 true Chr1: 3171534-3176910 Arabidopsis thaliana
AT1G09795 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3171534-3173533 Arabidopsis thaliana
AT1G09795 2.0kb downstream 2.0kb downstream 5377 true Chr1: 3173534-3178910 Arabidopsis thaliana
AT1G09795 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3176911-3178910 Arabidopsis thaliana
AT1G09795 5.0kb upstream 5.0kb upstream 8377 true Chr1: 3168534-3176910 Arabidopsis thaliana
AT1G09795 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3168534-3173533 Arabidopsis thaliana
AT1G09795 5.0kb downstream 5.0kb downstream 8377 true Chr1: 3173534-3181910 Arabidopsis thaliana
AT1G09795 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3176911-3181910 Arabidopsis thaliana
AT1G09795 10.0kb upstream 10.0kb upstream 13377 true Chr1: 3163534-3176910 Arabidopsis thaliana
AT1G09795 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3163534-3173533 Arabidopsis thaliana
AT1G09795 10.0kb downstream 10.0kb downstream 13377 true Chr1: 3173534-3186910 Arabidopsis thaliana
AT1G09795 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3176911-3186910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367089 5261 Brassicaceae View MSA
123840456 5264 Brassicales-Malvales View MSA
124322722 5266 SBM View MSA
124239271 5268 Malvidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.116     High  
cufflinks 6.798        
cufflinks 37.702     High  
cufflinks 7.247        
cufflinks 34.313     High  
cufflinks 6.716        

0 Strain