Gene : XTH33 A. thaliana TAIR10
Primary Identifier:  ? AT1G10550 Defline:  (1 of 1) PTHR31062:SF25 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED
Genomic Order:  1019 Name:  ? AT1G10550
Secondary Identifier:  ? PAC:19656277
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10550 0.5kb upstream 0.5kb upstream 2336 true Chr1: 3479153-3481488 Arabidopsis thaliana
AT1G10550 0.5kb upstream 0.5kb upstream 500 false Chr1: 3480989-3481488 Arabidopsis thaliana
AT1G10550 0.5kb downstream 0.5kb downstream 2336 true Chr1: 3478653-3480988 Arabidopsis thaliana
AT1G10550 0.5kb downstream 0.5kb downstream 500 false Chr1: 3478653-3479152 Arabidopsis thaliana
AT1G10550 1.0kb upstream 1.0kb upstream 2836 true Chr1: 3479153-3481988 Arabidopsis thaliana
AT1G10550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3480989-3481988 Arabidopsis thaliana
AT1G10550 1.0kb downstream 1.0kb downstream 2836 true Chr1: 3478153-3480988 Arabidopsis thaliana
AT1G10550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3478153-3479152 Arabidopsis thaliana
AT1G10550 2.0kb upstream 2.0kb upstream 3836 true Chr1: 3479153-3482988 Arabidopsis thaliana
AT1G10550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3480989-3482988 Arabidopsis thaliana
AT1G10550 2.0kb downstream 2.0kb downstream 3836 true Chr1: 3477153-3480988 Arabidopsis thaliana
AT1G10550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3477153-3479152 Arabidopsis thaliana
AT1G10550 5.0kb upstream 5.0kb upstream 6836 true Chr1: 3479153-3485988 Arabidopsis thaliana
AT1G10550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3480989-3485988 Arabidopsis thaliana
AT1G10550 5.0kb downstream 5.0kb downstream 6836 true Chr1: 3474153-3480988 Arabidopsis thaliana
AT1G10550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3474153-3479152 Arabidopsis thaliana
AT1G10550 10.0kb upstream 10.0kb upstream 11836 true Chr1: 3479153-3490988 Arabidopsis thaliana
AT1G10550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3480989-3490988 Arabidopsis thaliana
AT1G10550 10.0kb downstream 10.0kb downstream 11836 true Chr1: 3469153-3480988 Arabidopsis thaliana
AT1G10550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3469153-3479152 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375103 5261 Brassicaceae View MSA
123837548 5264 Brassicales-Malvales View MSA
124344490 5266 SBM View MSA
124242017 5268 Malvidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.021       High
cufflinks 4.855        
cufflinks 1.59       Low
cufflinks 4.685        
cufflinks 1.626       Low
cufflinks 7.582        

0 Strain