Gene : CRT1b A. thaliana TAIR10
Primary Identifier:  ? AT1G09210 Defline:  (1 of 3) K08057 - calreticulin (CALR)
Genomic Order:  872 Name:  ? AT1G09210
Secondary Identifier:  ? PAC:19649822
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09210 0.5kb upstream 0.5kb upstream 4409 true Chr1: 2972842-2977250 Arabidopsis thaliana
AT1G09210 0.5kb upstream 0.5kb upstream 500 false Chr1: 2976751-2977250 Arabidopsis thaliana
AT1G09210 0.5kb downstream 0.5kb downstream 4409 true Chr1: 2972342-2976750 Arabidopsis thaliana
AT1G09210 0.5kb downstream 0.5kb downstream 500 false Chr1: 2972342-2972841 Arabidopsis thaliana
AT1G09210 1.0kb upstream 1.0kb upstream 4909 true Chr1: 2972842-2977750 Arabidopsis thaliana
AT1G09210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2976751-2977750 Arabidopsis thaliana
AT1G09210 1.0kb downstream 1.0kb downstream 4909 true Chr1: 2971842-2976750 Arabidopsis thaliana
AT1G09210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2971842-2972841 Arabidopsis thaliana
AT1G09210 2.0kb upstream 2.0kb upstream 5909 true Chr1: 2972842-2978750 Arabidopsis thaliana
AT1G09210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2976751-2978750 Arabidopsis thaliana
AT1G09210 2.0kb downstream 2.0kb downstream 5909 true Chr1: 2970842-2976750 Arabidopsis thaliana
AT1G09210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2970842-2972841 Arabidopsis thaliana
AT1G09210 5.0kb upstream 5.0kb upstream 8909 true Chr1: 2972842-2981750 Arabidopsis thaliana
AT1G09210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2976751-2981750 Arabidopsis thaliana
AT1G09210 5.0kb downstream 5.0kb downstream 8909 true Chr1: 2967842-2976750 Arabidopsis thaliana
AT1G09210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2967842-2972841 Arabidopsis thaliana
AT1G09210 10.0kb upstream 10.0kb upstream 13909 true Chr1: 2972842-2986750 Arabidopsis thaliana
AT1G09210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2976751-2986750 Arabidopsis thaliana
AT1G09210 10.0kb downstream 10.0kb downstream 13909 true Chr1: 2962842-2976750 Arabidopsis thaliana
AT1G09210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2962842-2972841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376588 5261 Brassicaceae View MSA
123837114 5264 Brassicales-Malvales View MSA
124343526 5266 SBM View MSA
124240148 5268 Malvidae View MSA
124065619 5270 Rosid View MSA
123752125 5271 Pentapetalae View MSA
122787477 5272 Eudicot View MSA
122050061 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.392     High  
cufflinks 46.905     High  
cufflinks 29.112     High Low
cufflinks 57.045     High  
cufflinks 36.126     High  
cufflinks 57.853     High  

0 Strain