Gene : AT1G09310 A. thaliana TAIR10
Defline:  (1 of 22) PF04398 - Protein of unknown function, DUF538 (DUF538) Genomic Order:  883
Name:  ? AT1G09310 Secondary Identifier:  ? PAC:19649519
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09310 0.5kb upstream 0.5kb upstream 1326 true Chr1: 3008555-3009880 Arabidopsis thaliana
AT1G09310 0.5kb upstream 0.5kb upstream 500 false Chr1: 3008555-3009054 Arabidopsis thaliana
AT1G09310 0.5kb downstream 0.5kb downstream 1326 true Chr1: 3009055-3010380 Arabidopsis thaliana
AT1G09310 0.5kb downstream 0.5kb downstream 500 false Chr1: 3009881-3010380 Arabidopsis thaliana
AT1G09310 1.0kb upstream 1.0kb upstream 1826 true Chr1: 3008055-3009880 Arabidopsis thaliana
AT1G09310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3008055-3009054 Arabidopsis thaliana
AT1G09310 1.0kb downstream 1.0kb downstream 1826 true Chr1: 3009055-3010880 Arabidopsis thaliana
AT1G09310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3009881-3010880 Arabidopsis thaliana
AT1G09310 2.0kb upstream 2.0kb upstream 2826 true Chr1: 3007055-3009880 Arabidopsis thaliana
AT1G09310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3007055-3009054 Arabidopsis thaliana
AT1G09310 2.0kb downstream 2.0kb downstream 2826 true Chr1: 3009055-3011880 Arabidopsis thaliana
AT1G09310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3009881-3011880 Arabidopsis thaliana
AT1G09310 5.0kb upstream 5.0kb upstream 5826 true Chr1: 3004055-3009880 Arabidopsis thaliana
AT1G09310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3004055-3009054 Arabidopsis thaliana
AT1G09310 5.0kb downstream 5.0kb downstream 5826 true Chr1: 3009055-3014880 Arabidopsis thaliana
AT1G09310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3009881-3014880 Arabidopsis thaliana
AT1G09310 10.0kb upstream 10.0kb upstream 10826 true Chr1: 2999055-3009880 Arabidopsis thaliana
AT1G09310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2999055-3009054 Arabidopsis thaliana
AT1G09310 10.0kb downstream 10.0kb downstream 10826 true Chr1: 3009055-3019880 Arabidopsis thaliana
AT1G09310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3009881-3019880 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366107 5261 Brassicaceae View MSA
123839785 5264 Brassicales-Malvales View MSA
124338834 5266 SBM View MSA
124238463 5268 Malvidae View MSA
124067274 5270 Rosid View MSA
123752755 5271 Pentapetalae View MSA
122794473 5272 Eudicot View MSA
122046318 5273 Angiosperm View MSA
121348392 5274 Embryophyte View MSA
123380844 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 657.988     High  
cufflinks 0.639       Low
cufflinks 530.576     High  
cufflinks 3.553        
cufflinks 480.542     High  
cufflinks 1.462        

0 Strain