Gene : BON3 A. thaliana TAIR10
Primary Identifier:  ? AT1G08860 Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3
Genomic Order:  835 Name:  ? AT1G08860
Secondary Identifier:  ? PAC:19656913
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08860 0.5kb upstream 0.5kb upstream 4486 true Chr1: 2841653-2846138 Arabidopsis thaliana
AT1G08860 0.5kb upstream 0.5kb upstream 500 false Chr1: 2841653-2842152 Arabidopsis thaliana
AT1G08860 0.5kb downstream 0.5kb downstream 4486 true Chr1: 2842153-2846638 Arabidopsis thaliana
AT1G08860 0.5kb downstream 0.5kb downstream 500 false Chr1: 2846139-2846638 Arabidopsis thaliana
AT1G08860 1.0kb upstream 1.0kb upstream 4986 true Chr1: 2841153-2846138 Arabidopsis thaliana
AT1G08860 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2841153-2842152 Arabidopsis thaliana
AT1G08860 1.0kb downstream 1.0kb downstream 4986 true Chr1: 2842153-2847138 Arabidopsis thaliana
AT1G08860 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2846139-2847138 Arabidopsis thaliana
AT1G08860 2.0kb upstream 2.0kb upstream 5986 true Chr1: 2840153-2846138 Arabidopsis thaliana
AT1G08860 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2840153-2842152 Arabidopsis thaliana
AT1G08860 2.0kb downstream 2.0kb downstream 5986 true Chr1: 2842153-2848138 Arabidopsis thaliana
AT1G08860 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2846139-2848138 Arabidopsis thaliana
AT1G08860 5.0kb upstream 5.0kb upstream 8986 true Chr1: 2837153-2846138 Arabidopsis thaliana
AT1G08860 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2837153-2842152 Arabidopsis thaliana
AT1G08860 5.0kb downstream 5.0kb downstream 8986 true Chr1: 2842153-2851138 Arabidopsis thaliana
AT1G08860 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2846139-2851138 Arabidopsis thaliana
AT1G08860 10.0kb upstream 10.0kb upstream 13986 true Chr1: 2832153-2846138 Arabidopsis thaliana
AT1G08860 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2832153-2842152 Arabidopsis thaliana
AT1G08860 10.0kb downstream 10.0kb downstream 13986 true Chr1: 2842153-2856138 Arabidopsis thaliana
AT1G08860 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2846139-2856138 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362795 5261 Brassicaceae View MSA
123834920 5264 Brassicales-Malvales View MSA
124321979 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.274     Low High
cufflinks 0.023     Low  
cufflinks 0.013     Low Low
cufflinks 0.062     Low  
cufflinks 0.031     Low  
cufflinks 0.029     Low  

0 Strain