Gene : NRT2:1 A. thaliana TAIR10
Primary Identifier:  ? AT1G08090 Defline:  (1 of 3) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED
Genomic Order:  756 Name:  ? AT1G08090
Secondary Identifier:  ? PAC:19652010
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Genomics

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Expression

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8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08090 0.5kb upstream 0.5kb upstream 2589 true Chr1: 2523576-2526164 Arabidopsis thaliana
AT1G08090 0.5kb upstream 0.5kb upstream 500 false Chr1: 2523576-2524075 Arabidopsis thaliana
AT1G08090 0.5kb downstream 0.5kb downstream 2589 true Chr1: 2524076-2526664 Arabidopsis thaliana
AT1G08090 0.5kb downstream 0.5kb downstream 500 false Chr1: 2526165-2526664 Arabidopsis thaliana
AT1G08090 1.0kb upstream 1.0kb upstream 3089 true Chr1: 2523076-2526164 Arabidopsis thaliana
AT1G08090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2523076-2524075 Arabidopsis thaliana
AT1G08090 1.0kb downstream 1.0kb downstream 3089 true Chr1: 2524076-2527164 Arabidopsis thaliana
AT1G08090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2526165-2527164 Arabidopsis thaliana
AT1G08090 2.0kb upstream 2.0kb upstream 4089 true Chr1: 2522076-2526164 Arabidopsis thaliana
AT1G08090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2522076-2524075 Arabidopsis thaliana
AT1G08090 2.0kb downstream 2.0kb downstream 4089 true Chr1: 2524076-2528164 Arabidopsis thaliana
AT1G08090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2526165-2528164 Arabidopsis thaliana
AT1G08090 5.0kb upstream 5.0kb upstream 7089 true Chr1: 2519076-2526164 Arabidopsis thaliana
AT1G08090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2519076-2524075 Arabidopsis thaliana
AT1G08090 5.0kb downstream 5.0kb downstream 7089 true Chr1: 2524076-2531164 Arabidopsis thaliana
AT1G08090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2526165-2531164 Arabidopsis thaliana
AT1G08090 10.0kb upstream 10.0kb upstream 12089 true Chr1: 2514076-2526164 Arabidopsis thaliana
AT1G08090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2514076-2524075 Arabidopsis thaliana
AT1G08090 10.0kb downstream 10.0kb downstream 12089 true Chr1: 2524076-2536164 Arabidopsis thaliana
AT1G08090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2526165-2536164 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366417 5261 Brassicaceae View MSA
123839123 5264 Brassicales-Malvales View MSA
124337084 5266 SBM View MSA
124246816 5268 Malvidae View MSA
124073805 5270 Rosid View MSA
123747168 5271 Pentapetalae View MSA
122786429 5272 Eudicot View MSA
122041882 5273 Angiosperm View MSA
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.218     Low  
cufflinks 0.364        
cufflinks 0.035     Low  
cufflinks 0.247     Low  
cufflinks 0.008     Low Low
cufflinks 19.752       High

0 Strain