Gene : GATA10 A. thaliana TAIR10
Primary Identifier:  ? AT1G08000 Defline:  (1 of 2) PTHR10071:SF184 - GATA TRANSCRIPTION FACTOR 10-RELATED
Genomic Order:  744 Name:  ? AT1G08000
Secondary Identifier:  ? PAC:19653021
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08000 0.5kb upstream 0.5kb upstream 2370 true Chr1: 2483240-2485609 Arabidopsis thaliana
AT1G08000 0.5kb upstream 0.5kb upstream 500 false Chr1: 2485110-2485609 Arabidopsis thaliana
AT1G08000 0.5kb downstream 0.5kb downstream 2370 true Chr1: 2482740-2485109 Arabidopsis thaliana
AT1G08000 0.5kb downstream 0.5kb downstream 500 false Chr1: 2482740-2483239 Arabidopsis thaliana
AT1G08000 1.0kb upstream 1.0kb upstream 2870 true Chr1: 2483240-2486109 Arabidopsis thaliana
AT1G08000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2485110-2486109 Arabidopsis thaliana
AT1G08000 1.0kb downstream 1.0kb downstream 2870 true Chr1: 2482240-2485109 Arabidopsis thaliana
AT1G08000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2482240-2483239 Arabidopsis thaliana
AT1G08000 2.0kb upstream 2.0kb upstream 3870 true Chr1: 2483240-2487109 Arabidopsis thaliana
AT1G08000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2485110-2487109 Arabidopsis thaliana
AT1G08000 2.0kb downstream 2.0kb downstream 3870 true Chr1: 2481240-2485109 Arabidopsis thaliana
AT1G08000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2481240-2483239 Arabidopsis thaliana
AT1G08000 5.0kb upstream 5.0kb upstream 6870 true Chr1: 2483240-2490109 Arabidopsis thaliana
AT1G08000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2485110-2490109 Arabidopsis thaliana
AT1G08000 5.0kb downstream 5.0kb downstream 6870 true Chr1: 2478240-2485109 Arabidopsis thaliana
AT1G08000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2478240-2483239 Arabidopsis thaliana
AT1G08000 10.0kb upstream 10.0kb upstream 11870 true Chr1: 2483240-2495109 Arabidopsis thaliana
AT1G08000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2485110-2495109 Arabidopsis thaliana
AT1G08000 10.0kb downstream 10.0kb downstream 11870 true Chr1: 2473240-2485109 Arabidopsis thaliana
AT1G08000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2473240-2483239 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328628 5261 Brassicaceae Singleton cluster - no MSA
123769971 5264 Brassicales-Malvales Singleton cluster - no MSA
124268521 5266 SBM Singleton cluster - no MSA
124124718 5268 Malvidae Singleton cluster - no MSA
124064545 5270 Rosid View MSA
123749114 5271 Pentapetalae View MSA
122796835 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.491        
cufflinks 2.698        
cufflinks 2.363        
cufflinks 2.698        
cufflinks 1.946       Low
cufflinks 2.795        

0 Strain