Gene : AT1G07300 A. thaliana TAIR10
Defline:  (1 of 2) KOG2934 - Uncharacterized conserved protein, contains Josephin domain Genomic Order:  664
Name:  ? AT1G07300 Secondary Identifier:  ? PAC:19650209
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07300 0.5kb upstream 0.5kb upstream 1235 true Chr1: 2245758-2246992 Arabidopsis thaliana
AT1G07300 0.5kb upstream 0.5kb upstream 500 false Chr1: 2246493-2246992 Arabidopsis thaliana
AT1G07300 0.5kb downstream 0.5kb downstream 1235 true Chr1: 2245258-2246492 Arabidopsis thaliana
AT1G07300 0.5kb downstream 0.5kb downstream 500 false Chr1: 2245258-2245757 Arabidopsis thaliana
AT1G07300 1.0kb upstream 1.0kb upstream 1735 true Chr1: 2245758-2247492 Arabidopsis thaliana
AT1G07300 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2246493-2247492 Arabidopsis thaliana
AT1G07300 1.0kb downstream 1.0kb downstream 1735 true Chr1: 2244758-2246492 Arabidopsis thaliana
AT1G07300 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2244758-2245757 Arabidopsis thaliana
AT1G07300 2.0kb upstream 2.0kb upstream 2735 true Chr1: 2245758-2248492 Arabidopsis thaliana
AT1G07300 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2246493-2248492 Arabidopsis thaliana
AT1G07300 2.0kb downstream 2.0kb downstream 2735 true Chr1: 2243758-2246492 Arabidopsis thaliana
AT1G07300 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2243758-2245757 Arabidopsis thaliana
AT1G07300 5.0kb upstream 5.0kb upstream 5735 true Chr1: 2245758-2251492 Arabidopsis thaliana
AT1G07300 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2246493-2251492 Arabidopsis thaliana
AT1G07300 5.0kb downstream 5.0kb downstream 5735 true Chr1: 2240758-2246492 Arabidopsis thaliana
AT1G07300 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2240758-2245757 Arabidopsis thaliana
AT1G07300 10.0kb upstream 10.0kb upstream 10735 true Chr1: 2245758-2256492 Arabidopsis thaliana
AT1G07300 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2246493-2256492 Arabidopsis thaliana
AT1G07300 10.0kb downstream 10.0kb downstream 10735 true Chr1: 2235758-2246492 Arabidopsis thaliana
AT1G07300 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2235758-2245757 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366393 5261 Brassicaceae View MSA
123836009 5264 Brassicales-Malvales View MSA
124349973 5266 SBM View MSA
124249096 5268 Malvidae View MSA
124062802 5270 Rosid View MSA
123741869 5271 Pentapetalae View MSA
122770150 5272 Eudicot View MSA
122050114 5273 Angiosperm View MSA
121311748 5274 Embryophyte View MSA
123349004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.561        
cufflinks 8.405        
cufflinks 4.666       Low
cufflinks 10.363       High
cufflinks 6.11        
cufflinks 7.736        

0 Strain