Gene : AT1G07040 A. thaliana TAIR10
Defline:  (1 of 3) PF07063 - Domain of unknown function (DUF1338) (DUF1338) Genomic Order:  637
Name:  ? AT1G07040 Secondary Identifier:  ? PAC:19651460
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07040 0.5kb upstream 0.5kb upstream 2871 true Chr1: 2160938-2163808 Arabidopsis thaliana
AT1G07040 0.5kb upstream 0.5kb upstream 500 false Chr1: 2163309-2163808 Arabidopsis thaliana
AT1G07040 0.5kb downstream 0.5kb downstream 2871 true Chr1: 2160438-2163308 Arabidopsis thaliana
AT1G07040 0.5kb downstream 0.5kb downstream 500 false Chr1: 2160438-2160937 Arabidopsis thaliana
AT1G07040 1.0kb upstream 1.0kb upstream 3371 true Chr1: 2160938-2164308 Arabidopsis thaliana
AT1G07040 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2163309-2164308 Arabidopsis thaliana
AT1G07040 1.0kb downstream 1.0kb downstream 3371 true Chr1: 2159938-2163308 Arabidopsis thaliana
AT1G07040 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2159938-2160937 Arabidopsis thaliana
AT1G07040 2.0kb upstream 2.0kb upstream 4371 true Chr1: 2160938-2165308 Arabidopsis thaliana
AT1G07040 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2163309-2165308 Arabidopsis thaliana
AT1G07040 2.0kb downstream 2.0kb downstream 4371 true Chr1: 2158938-2163308 Arabidopsis thaliana
AT1G07040 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2158938-2160937 Arabidopsis thaliana
AT1G07040 5.0kb upstream 5.0kb upstream 7371 true Chr1: 2160938-2168308 Arabidopsis thaliana
AT1G07040 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2163309-2168308 Arabidopsis thaliana
AT1G07040 5.0kb downstream 5.0kb downstream 7371 true Chr1: 2155938-2163308 Arabidopsis thaliana
AT1G07040 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2155938-2160937 Arabidopsis thaliana
AT1G07040 10.0kb upstream 10.0kb upstream 12371 true Chr1: 2160938-2173308 Arabidopsis thaliana
AT1G07040 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2163309-2173308 Arabidopsis thaliana
AT1G07040 10.0kb downstream 10.0kb downstream 12371 true Chr1: 2150938-2163308 Arabidopsis thaliana
AT1G07040 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2150938-2160937 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362665 5261 Brassicaceae View MSA
123833970 5264 Brassicales-Malvales View MSA
124339849 5266 SBM View MSA
124239711 5268 Malvidae View MSA
124061001 5270 Rosid View MSA
123746435 5271 Pentapetalae View MSA
122792736 5272 Eudicot View MSA
122043338 5273 Angiosperm View MSA
121346049 5274 Embryophyte View MSA
123425162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.912        
cufflinks 11.384        
cufflinks 40.06     High  
cufflinks 14.784        
cufflinks 53.516     High High
cufflinks 5.788       Low

0 Strain