Gene : bZIP52 A. thaliana TAIR10
Primary Identifier:  ? AT1G06850 Defline:  (1 of 61) PF00170 - bZIP transcription factor (bZIP_1)
Genomic Order:  618 Name:  ? AT1G06850
Secondary Identifier:  ? PAC:19654800
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06850 0.5kb upstream 0.5kb upstream 2202 true Chr1: 2104548-2106749 Arabidopsis thaliana
AT1G06850 0.5kb upstream 0.5kb upstream 500 false Chr1: 2104548-2105047 Arabidopsis thaliana
AT1G06850 0.5kb downstream 0.5kb downstream 2202 true Chr1: 2105048-2107249 Arabidopsis thaliana
AT1G06850 0.5kb downstream 0.5kb downstream 500 false Chr1: 2106750-2107249 Arabidopsis thaliana
AT1G06850 1.0kb upstream 1.0kb upstream 2702 true Chr1: 2104048-2106749 Arabidopsis thaliana
AT1G06850 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2104048-2105047 Arabidopsis thaliana
AT1G06850 1.0kb downstream 1.0kb downstream 2702 true Chr1: 2105048-2107749 Arabidopsis thaliana
AT1G06850 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2106750-2107749 Arabidopsis thaliana
AT1G06850 2.0kb upstream 2.0kb upstream 3702 true Chr1: 2103048-2106749 Arabidopsis thaliana
AT1G06850 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2103048-2105047 Arabidopsis thaliana
AT1G06850 2.0kb downstream 2.0kb downstream 3702 true Chr1: 2105048-2108749 Arabidopsis thaliana
AT1G06850 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2106750-2108749 Arabidopsis thaliana
AT1G06850 5.0kb upstream 5.0kb upstream 6702 true Chr1: 2100048-2106749 Arabidopsis thaliana
AT1G06850 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2100048-2105047 Arabidopsis thaliana
AT1G06850 5.0kb downstream 5.0kb downstream 6702 true Chr1: 2105048-2111749 Arabidopsis thaliana
AT1G06850 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2106750-2111749 Arabidopsis thaliana
AT1G06850 10.0kb upstream 10.0kb upstream 11702 true Chr1: 2095048-2106749 Arabidopsis thaliana
AT1G06850 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2095048-2105047 Arabidopsis thaliana
AT1G06850 10.0kb downstream 10.0kb downstream 11702 true Chr1: 2105048-2116749 Arabidopsis thaliana
AT1G06850 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2106750-2116749 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364932 5261 Brassicaceae View MSA
123840975 5264 Brassicales-Malvales View MSA
124337734 5266 SBM View MSA
124243737 5268 Malvidae View MSA
124064643 5270 Rosid View MSA
123746615 5271 Pentapetalae View MSA
122797206 5272 Eudicot View MSA
122046720 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310646 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.112        
cufflinks 6.044        
cufflinks 3.113        
cufflinks 6.017        
cufflinks 2.806       Low
cufflinks 6.06        

0 Strain