Gene : AT1G06660 A. thaliana TAIR10
Genomic Order:  600 Name:  ? AT1G06660
Secondary Identifier:  ? PAC:19656671
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06660 0.5kb upstream 0.5kb upstream 3436 true Chr1: 2037311-2040746 Arabidopsis thaliana
AT1G06660 0.5kb upstream 0.5kb upstream 500 false Chr1: 2040247-2040746 Arabidopsis thaliana
AT1G06660 0.5kb downstream 0.5kb downstream 3436 true Chr1: 2036811-2040246 Arabidopsis thaliana
AT1G06660 0.5kb downstream 0.5kb downstream 500 false Chr1: 2036811-2037310 Arabidopsis thaliana
AT1G06660 1.0kb upstream 1.0kb upstream 3936 true Chr1: 2037311-2041246 Arabidopsis thaliana
AT1G06660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2040247-2041246 Arabidopsis thaliana
AT1G06660 1.0kb downstream 1.0kb downstream 3936 true Chr1: 2036311-2040246 Arabidopsis thaliana
AT1G06660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2036311-2037310 Arabidopsis thaliana
AT1G06660 2.0kb upstream 2.0kb upstream 4936 true Chr1: 2037311-2042246 Arabidopsis thaliana
AT1G06660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2040247-2042246 Arabidopsis thaliana
AT1G06660 2.0kb downstream 2.0kb downstream 4936 true Chr1: 2035311-2040246 Arabidopsis thaliana
AT1G06660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2035311-2037310 Arabidopsis thaliana
AT1G06660 5.0kb upstream 5.0kb upstream 7936 true Chr1: 2037311-2045246 Arabidopsis thaliana
AT1G06660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2040247-2045246 Arabidopsis thaliana
AT1G06660 5.0kb downstream 5.0kb downstream 7936 true Chr1: 2032311-2040246 Arabidopsis thaliana
AT1G06660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2032311-2037310 Arabidopsis thaliana
AT1G06660 10.0kb upstream 10.0kb upstream 12936 true Chr1: 2037311-2050246 Arabidopsis thaliana
AT1G06660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2040247-2050246 Arabidopsis thaliana
AT1G06660 10.0kb downstream 10.0kb downstream 12936 true Chr1: 2027311-2040246 Arabidopsis thaliana
AT1G06660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2027311-2037310 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373229 5261 Brassicaceae View MSA
123832283 5264 Brassicales-Malvales View MSA
124346107 5266 SBM View MSA
124237963 5268 Malvidae View MSA
124068780 5270 Rosid View MSA
123745488 5271 Pentapetalae View MSA
122794702 5272 Eudicot View MSA
122045021 5273 Angiosperm View MSA
121349890 5274 Embryophyte View MSA
123381485 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.749        
cufflinks 2.685        
cufflinks 0.326       Low
cufflinks 2.346        
cufflinks 0.322       Low
cufflinks 4.406       High

0 Strain