Gene : AT1G06270 A. thaliana TAIR10
Defline:  (1 of 423) PF13041 - PPR repeat family (PPR_2) Genomic Order:  563
Name:  ? AT1G06270 Secondary Identifier:  ? PAC:19657019
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06270 0.5kb upstream 0.5kb upstream 2173 true Chr1: 1918088-1920260 Arabidopsis thaliana
AT1G06270 0.5kb upstream 0.5kb upstream 500 false Chr1: 1919761-1920260 Arabidopsis thaliana
AT1G06270 0.5kb downstream 0.5kb downstream 2173 true Chr1: 1917588-1919760 Arabidopsis thaliana
AT1G06270 0.5kb downstream 0.5kb downstream 500 false Chr1: 1917588-1918087 Arabidopsis thaliana
AT1G06270 1.0kb upstream 1.0kb upstream 2673 true Chr1: 1918088-1920760 Arabidopsis thaliana
AT1G06270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1919761-1920760 Arabidopsis thaliana
AT1G06270 1.0kb downstream 1.0kb downstream 2673 true Chr1: 1917088-1919760 Arabidopsis thaliana
AT1G06270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1917088-1918087 Arabidopsis thaliana
AT1G06270 2.0kb upstream 2.0kb upstream 3673 true Chr1: 1918088-1921760 Arabidopsis thaliana
AT1G06270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1919761-1921760 Arabidopsis thaliana
AT1G06270 2.0kb downstream 2.0kb downstream 3673 true Chr1: 1916088-1919760 Arabidopsis thaliana
AT1G06270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1916088-1918087 Arabidopsis thaliana
AT1G06270 5.0kb upstream 5.0kb upstream 6673 true Chr1: 1918088-1924760 Arabidopsis thaliana
AT1G06270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1919761-1924760 Arabidopsis thaliana
AT1G06270 5.0kb downstream 5.0kb downstream 6673 true Chr1: 1913088-1919760 Arabidopsis thaliana
AT1G06270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1913088-1918087 Arabidopsis thaliana
AT1G06270 10.0kb upstream 10.0kb upstream 11673 true Chr1: 1918088-1929760 Arabidopsis thaliana
AT1G06270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1919761-1929760 Arabidopsis thaliana
AT1G06270 10.0kb downstream 10.0kb downstream 11673 true Chr1: 1908088-1919760 Arabidopsis thaliana
AT1G06270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1908088-1918087 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791718 5273 Angiosperm View MSA
122361517 5261 Brassicaceae View MSA
123829887 5264 Brassicales-Malvales View MSA
124339386 5266 SBM View MSA
124240778 5268 Malvidae View MSA
124062312 5270 Rosid View MSA
123736889 5271 Pentapetalae View MSA
122787074 5272 Eudicot View MSA
121063019 5274 Embryophyte View MSA
123102806 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.822        
cufflinks 6.694        
cufflinks 2.438        
cufflinks 6.563        
cufflinks 2.099       Low
cufflinks 5.819        

0 Strain