Gene : AT1G06380 A. thaliana TAIR10
Defline:  (1 of 3) K14775 - ribosome biogenesis protein UTP30 (UTP30, RSL1D1) Genomic Order:  572
Name:  ? AT1G06380 Secondary Identifier:  ? PAC:19656069
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06380 0.5kb upstream 0.5kb upstream 1453 true Chr1: 1944624-1946076 Arabidopsis thaliana
AT1G06380 0.5kb upstream 0.5kb upstream 500 false Chr1: 1944624-1945123 Arabidopsis thaliana
AT1G06380 0.5kb downstream 0.5kb downstream 1453 true Chr1: 1945124-1946576 Arabidopsis thaliana
AT1G06380 0.5kb downstream 0.5kb downstream 500 false Chr1: 1946077-1946576 Arabidopsis thaliana
AT1G06380 1.0kb upstream 1.0kb upstream 1953 true Chr1: 1944124-1946076 Arabidopsis thaliana
AT1G06380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1944124-1945123 Arabidopsis thaliana
AT1G06380 1.0kb downstream 1.0kb downstream 1953 true Chr1: 1945124-1947076 Arabidopsis thaliana
AT1G06380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1946077-1947076 Arabidopsis thaliana
AT1G06380 2.0kb upstream 2.0kb upstream 2953 true Chr1: 1943124-1946076 Arabidopsis thaliana
AT1G06380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1943124-1945123 Arabidopsis thaliana
AT1G06380 2.0kb downstream 2.0kb downstream 2953 true Chr1: 1945124-1948076 Arabidopsis thaliana
AT1G06380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1946077-1948076 Arabidopsis thaliana
AT1G06380 5.0kb upstream 5.0kb upstream 5953 true Chr1: 1940124-1946076 Arabidopsis thaliana
AT1G06380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1940124-1945123 Arabidopsis thaliana
AT1G06380 5.0kb downstream 5.0kb downstream 5953 true Chr1: 1945124-1951076 Arabidopsis thaliana
AT1G06380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1946077-1951076 Arabidopsis thaliana
AT1G06380 10.0kb upstream 10.0kb upstream 10953 true Chr1: 1935124-1946076 Arabidopsis thaliana
AT1G06380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1935124-1945123 Arabidopsis thaliana
AT1G06380 10.0kb downstream 10.0kb downstream 10953 true Chr1: 1945124-1956076 Arabidopsis thaliana
AT1G06380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1946077-1956076 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369282 5261 Brassicaceae View MSA
123799749 5264 Brassicales-Malvales View MSA
124297238 5266 SBM View MSA
124149181 5268 Malvidae View MSA
124067749 5270 Rosid View MSA
123741990 5271 Pentapetalae View MSA
122792570 5272 Eudicot View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.01        
cufflinks 9.222        
cufflinks 7.343        
cufflinks 9.249        
cufflinks 6.257       Low
cufflinks 10.435       High

0 Strain