Gene : AT1G06100 A. thaliana TAIR10
Defline:  (1 of 9) PTHR11351//PTHR11351:SF2 - ACYL-COA DESATURASE // DELTA-9 ACYL-LIPID DESATURASE 1-RELATED Genomic Order:  541
Name:  ? AT1G06100 Secondary Identifier:  ? PAC:19654276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06100 0.5kb upstream 0.5kb upstream 1990 true Chr1: 1851030-1853019 Arabidopsis thaliana
AT1G06100 0.5kb upstream 0.5kb upstream 500 false Chr1: 1851030-1851529 Arabidopsis thaliana
AT1G06100 0.5kb downstream 0.5kb downstream 1990 true Chr1: 1851530-1853519 Arabidopsis thaliana
AT1G06100 0.5kb downstream 0.5kb downstream 500 false Chr1: 1853020-1853519 Arabidopsis thaliana
AT1G06100 1.0kb upstream 1.0kb upstream 2490 true Chr1: 1850530-1853019 Arabidopsis thaliana
AT1G06100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1850530-1851529 Arabidopsis thaliana
AT1G06100 1.0kb downstream 1.0kb downstream 2490 true Chr1: 1851530-1854019 Arabidopsis thaliana
AT1G06100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1853020-1854019 Arabidopsis thaliana
AT1G06100 2.0kb upstream 2.0kb upstream 3490 true Chr1: 1849530-1853019 Arabidopsis thaliana
AT1G06100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1849530-1851529 Arabidopsis thaliana
AT1G06100 2.0kb downstream 2.0kb downstream 3490 true Chr1: 1851530-1855019 Arabidopsis thaliana
AT1G06100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1853020-1855019 Arabidopsis thaliana
AT1G06100 5.0kb upstream 5.0kb upstream 6490 true Chr1: 1846530-1853019 Arabidopsis thaliana
AT1G06100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1846530-1851529 Arabidopsis thaliana
AT1G06100 5.0kb downstream 5.0kb downstream 6490 true Chr1: 1851530-1858019 Arabidopsis thaliana
AT1G06100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1853020-1858019 Arabidopsis thaliana
AT1G06100 10.0kb upstream 10.0kb upstream 11490 true Chr1: 1841530-1853019 Arabidopsis thaliana
AT1G06100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1841530-1851529 Arabidopsis thaliana
AT1G06100 10.0kb downstream 10.0kb downstream 11490 true Chr1: 1851530-1863019 Arabidopsis thaliana
AT1G06100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1853020-1863019 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495674 5273 Angiosperm View MSA
122331855 5261 Brassicaceae View MSA
123772985 5264 Brassicales-Malvales View MSA
124271489 5266 SBM View MSA
124127470 5268 Malvidae View MSA
123856316 5270 Rosid View MSA
123442252 5271 Pentapetalae View MSA
122477830 5272 Eudicot View MSA
120769038 5274 Embryophyte View MSA
122811417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.714        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.449        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.969        
cufflinks 0.032     Low Low

0 Strain