Gene : AT1G06090 A. thaliana TAIR10
Defline:  (1 of 9) PTHR11351//PTHR11351:SF2 - ACYL-COA DESATURASE // DELTA-9 ACYL-LIPID DESATURASE 1-RELATED Genomic Order:  540
Name:  ? AT1G06090 Secondary Identifier:  ? PAC:19656421
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06090 0.5kb upstream 0.5kb upstream 2311 true Chr1: 1847383-1849693 Arabidopsis thaliana
AT1G06090 0.5kb upstream 0.5kb upstream 500 false Chr1: 1847383-1847882 Arabidopsis thaliana
AT1G06090 0.5kb downstream 0.5kb downstream 2311 true Chr1: 1847883-1850193 Arabidopsis thaliana
AT1G06090 0.5kb downstream 0.5kb downstream 500 false Chr1: 1849694-1850193 Arabidopsis thaliana
AT1G06090 1.0kb upstream 1.0kb upstream 2811 true Chr1: 1846883-1849693 Arabidopsis thaliana
AT1G06090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1846883-1847882 Arabidopsis thaliana
AT1G06090 1.0kb downstream 1.0kb downstream 2811 true Chr1: 1847883-1850693 Arabidopsis thaliana
AT1G06090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1849694-1850693 Arabidopsis thaliana
AT1G06090 2.0kb upstream 2.0kb upstream 3811 true Chr1: 1845883-1849693 Arabidopsis thaliana
AT1G06090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1845883-1847882 Arabidopsis thaliana
AT1G06090 2.0kb downstream 2.0kb downstream 3811 true Chr1: 1847883-1851693 Arabidopsis thaliana
AT1G06090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1849694-1851693 Arabidopsis thaliana
AT1G06090 5.0kb upstream 5.0kb upstream 6811 true Chr1: 1842883-1849693 Arabidopsis thaliana
AT1G06090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1842883-1847882 Arabidopsis thaliana
AT1G06090 5.0kb downstream 5.0kb downstream 6811 true Chr1: 1847883-1854693 Arabidopsis thaliana
AT1G06090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1849694-1854693 Arabidopsis thaliana
AT1G06090 10.0kb upstream 10.0kb upstream 11811 true Chr1: 1837883-1849693 Arabidopsis thaliana
AT1G06090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1837883-1847882 Arabidopsis thaliana
AT1G06090 10.0kb downstream 10.0kb downstream 11811 true Chr1: 1847883-1859693 Arabidopsis thaliana
AT1G06090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1849694-1859693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510420 5273 Angiosperm View MSA
122363617 5261 Brassicaceae View MSA
123798580 5264 Brassicales-Malvales View MSA
124296196 5266 SBM View MSA
124148417 5268 Malvidae View MSA
123874415 5270 Rosid View MSA
123458393 5271 Pentapetalae View MSA
122493799 5272 Eudicot View MSA
120783520 5274 Embryophyte View MSA
122825520 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603        
cufflinks 2.243        
cufflinks 0.305       Low
cufflinks 5.547        
cufflinks 0.313        
cufflinks 9.425       High

0 Strain