Gene : ADS1 A. thaliana TAIR10
Primary Identifier:  ? AT1G06080 Defline:  (1 of 5) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC)
Genomic Order:  539 Name:  ? AT1G06080
Secondary Identifier:  ? PAC:19650198
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06080 0.5kb upstream 0.5kb upstream 3235 true Chr1: 1843068-1846302 Arabidopsis thaliana
AT1G06080 0.5kb upstream 0.5kb upstream 500 false Chr1: 1843068-1843567 Arabidopsis thaliana
AT1G06080 0.5kb downstream 0.5kb downstream 3235 true Chr1: 1843568-1846802 Arabidopsis thaliana
AT1G06080 0.5kb downstream 0.5kb downstream 500 false Chr1: 1846303-1846802 Arabidopsis thaliana
AT1G06080 1.0kb upstream 1.0kb upstream 3735 true Chr1: 1842568-1846302 Arabidopsis thaliana
AT1G06080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1842568-1843567 Arabidopsis thaliana
AT1G06080 1.0kb downstream 1.0kb downstream 3735 true Chr1: 1843568-1847302 Arabidopsis thaliana
AT1G06080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1846303-1847302 Arabidopsis thaliana
AT1G06080 2.0kb upstream 2.0kb upstream 4735 true Chr1: 1841568-1846302 Arabidopsis thaliana
AT1G06080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1841568-1843567 Arabidopsis thaliana
AT1G06080 2.0kb downstream 2.0kb downstream 4735 true Chr1: 1843568-1848302 Arabidopsis thaliana
AT1G06080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1846303-1848302 Arabidopsis thaliana
AT1G06080 5.0kb upstream 5.0kb upstream 7735 true Chr1: 1838568-1846302 Arabidopsis thaliana
AT1G06080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1838568-1843567 Arabidopsis thaliana
AT1G06080 5.0kb downstream 5.0kb downstream 7735 true Chr1: 1843568-1851302 Arabidopsis thaliana
AT1G06080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1846303-1851302 Arabidopsis thaliana
AT1G06080 10.0kb upstream 10.0kb upstream 12735 true Chr1: 1833568-1846302 Arabidopsis thaliana
AT1G06080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1833568-1843567 Arabidopsis thaliana
AT1G06080 10.0kb downstream 10.0kb downstream 12735 true Chr1: 1843568-1856302 Arabidopsis thaliana
AT1G06080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1846303-1856302 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785650 5273 Angiosperm View MSA
122380798 5261 Brassicaceae View MSA
123802910 5264 Brassicales-Malvales View MSA
124300065 5266 SBM View MSA
124151336 5268 Malvidae View MSA
124037966 5270 Rosid View MSA
123758143 5271 Pentapetalae View MSA
122779130 5272 Eudicot View MSA
121057012 5274 Embryophyte View MSA
123096895 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.063        
cufflinks 1.136        
cufflinks 0.665        
cufflinks 2.566       High
cufflinks 0.405       Low
cufflinks 1.473        

0 Strain