Gene : LEC1 A. thaliana TAIR10
Primary Identifier:  ? AT1G21970 Defline:  (1 of 2) PTHR11064:SF20 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6-RELATED
Genomic Order:  2220 Name:  ? AT1G21970
Secondary Identifier:  ? PAC:19654594
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21970 0.5kb upstream 0.5kb upstream 2541 true Chr1: 7727577-7730117 Arabidopsis thaliana
AT1G21970 0.5kb upstream 0.5kb upstream 500 false Chr1: 7729618-7730117 Arabidopsis thaliana
AT1G21970 0.5kb downstream 0.5kb downstream 2541 true Chr1: 7727077-7729617 Arabidopsis thaliana
AT1G21970 0.5kb downstream 0.5kb downstream 500 false Chr1: 7727077-7727576 Arabidopsis thaliana
AT1G21970 1.0kb upstream 1.0kb upstream 3041 true Chr1: 7727577-7730617 Arabidopsis thaliana
AT1G21970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7729618-7730617 Arabidopsis thaliana
AT1G21970 1.0kb downstream 1.0kb downstream 3041 true Chr1: 7726577-7729617 Arabidopsis thaliana
AT1G21970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7726577-7727576 Arabidopsis thaliana
AT1G21970 2.0kb upstream 2.0kb upstream 4041 true Chr1: 7727577-7731617 Arabidopsis thaliana
AT1G21970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7729618-7731617 Arabidopsis thaliana
AT1G21970 2.0kb downstream 2.0kb downstream 4041 true Chr1: 7725577-7729617 Arabidopsis thaliana
AT1G21970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7725577-7727576 Arabidopsis thaliana
AT1G21970 5.0kb upstream 5.0kb upstream 7041 true Chr1: 7727577-7734617 Arabidopsis thaliana
AT1G21970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7729618-7734617 Arabidopsis thaliana
AT1G21970 5.0kb downstream 5.0kb downstream 7041 true Chr1: 7722577-7729617 Arabidopsis thaliana
AT1G21970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7722577-7727576 Arabidopsis thaliana
AT1G21970 10.0kb upstream 10.0kb upstream 12041 true Chr1: 7727577-7739617 Arabidopsis thaliana
AT1G21970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7729618-7739617 Arabidopsis thaliana
AT1G21970 10.0kb downstream 10.0kb downstream 12041 true Chr1: 7717577-7729617 Arabidopsis thaliana
AT1G21970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7717577-7727576 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377618 5261 Brassicaceae View MSA
123829779 5264 Brassicales-Malvales View MSA
124349168 5266 SBM View MSA
124244500 5268 Malvidae View MSA
124066588 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain