Gene : AT1G05350 A. thaliana TAIR10
Defline:  (1 of 1) K12164 - ubiquitin-like modifier-activating enzyme 5 (UBA5, UBE1DC1) Genomic Order:  459
Name:  ? AT1G05350 Secondary Identifier:  ? PAC:19652097
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05350 0.5kb upstream 0.5kb upstream 3946 true Chr1: 1560678-1564623 Arabidopsis thaliana
AT1G05350 0.5kb upstream 0.5kb upstream 500 false Chr1: 1564124-1564623 Arabidopsis thaliana
AT1G05350 0.5kb downstream 0.5kb downstream 3946 true Chr1: 1560178-1564123 Arabidopsis thaliana
AT1G05350 0.5kb downstream 0.5kb downstream 500 false Chr1: 1560178-1560677 Arabidopsis thaliana
AT1G05350 1.0kb upstream 1.0kb upstream 4446 true Chr1: 1560678-1565123 Arabidopsis thaliana
AT1G05350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1564124-1565123 Arabidopsis thaliana
AT1G05350 1.0kb downstream 1.0kb downstream 4446 true Chr1: 1559678-1564123 Arabidopsis thaliana
AT1G05350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1559678-1560677 Arabidopsis thaliana
AT1G05350 2.0kb upstream 2.0kb upstream 5446 true Chr1: 1560678-1566123 Arabidopsis thaliana
AT1G05350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1564124-1566123 Arabidopsis thaliana
AT1G05350 2.0kb downstream 2.0kb downstream 5446 true Chr1: 1558678-1564123 Arabidopsis thaliana
AT1G05350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1558678-1560677 Arabidopsis thaliana
AT1G05350 5.0kb upstream 5.0kb upstream 8446 true Chr1: 1560678-1569123 Arabidopsis thaliana
AT1G05350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1564124-1569123 Arabidopsis thaliana
AT1G05350 5.0kb downstream 5.0kb downstream 8446 true Chr1: 1555678-1564123 Arabidopsis thaliana
AT1G05350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1555678-1560677 Arabidopsis thaliana
AT1G05350 10.0kb upstream 10.0kb upstream 13446 true Chr1: 1560678-1574123 Arabidopsis thaliana
AT1G05350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1564124-1574123 Arabidopsis thaliana
AT1G05350 10.0kb downstream 10.0kb downstream 13446 true Chr1: 1550678-1564123 Arabidopsis thaliana
AT1G05350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1550678-1560677 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367387 5261 Brassicaceae View MSA
123832509 5264 Brassicales-Malvales View MSA
124339391 5266 SBM View MSA
124239511 5268 Malvidae View MSA
124066272 5270 Rosid View MSA
123740899 5271 Pentapetalae View MSA
122785779 5272 Eudicot View MSA
122041922 5273 Angiosperm View MSA
121347564 5274 Embryophyte View MSA
123424275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99        
cufflinks 13.576        
cufflinks 7.57       Low
cufflinks 13.382        
cufflinks 7.232       Low
cufflinks 14.181        

0 Strain