Gene : AT1G04490 A. thaliana TAIR10
Defline:  (1 of 8) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  363
Name:  ? AT1G04490 Secondary Identifier:  ? PAC:19650152
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04490 0.5kb upstream 0.5kb upstream 2690 true Chr1: 1217948-1220637 Arabidopsis thaliana
AT1G04490 0.5kb upstream 0.5kb upstream 500 false Chr1: 1220138-1220637 Arabidopsis thaliana
AT1G04490 0.5kb downstream 0.5kb downstream 2690 true Chr1: 1217448-1220137 Arabidopsis thaliana
AT1G04490 0.5kb downstream 0.5kb downstream 500 false Chr1: 1217448-1217947 Arabidopsis thaliana
AT1G04490 1.0kb upstream 1.0kb upstream 3190 true Chr1: 1217948-1221137 Arabidopsis thaliana
AT1G04490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1220138-1221137 Arabidopsis thaliana
AT1G04490 1.0kb downstream 1.0kb downstream 3190 true Chr1: 1216948-1220137 Arabidopsis thaliana
AT1G04490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1216948-1217947 Arabidopsis thaliana
AT1G04490 2.0kb upstream 2.0kb upstream 4190 true Chr1: 1217948-1222137 Arabidopsis thaliana
AT1G04490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1220138-1222137 Arabidopsis thaliana
AT1G04490 2.0kb downstream 2.0kb downstream 4190 true Chr1: 1215948-1220137 Arabidopsis thaliana
AT1G04490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1215948-1217947 Arabidopsis thaliana
AT1G04490 5.0kb upstream 5.0kb upstream 7190 true Chr1: 1217948-1225137 Arabidopsis thaliana
AT1G04490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1220138-1225137 Arabidopsis thaliana
AT1G04490 5.0kb downstream 5.0kb downstream 7190 true Chr1: 1212948-1220137 Arabidopsis thaliana
AT1G04490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1212948-1217947 Arabidopsis thaliana
AT1G04490 10.0kb upstream 10.0kb upstream 12190 true Chr1: 1217948-1230137 Arabidopsis thaliana
AT1G04490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1220138-1230137 Arabidopsis thaliana
AT1G04490 10.0kb downstream 10.0kb downstream 12190 true Chr1: 1207948-1220137 Arabidopsis thaliana
AT1G04490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1207948-1217947 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781822 5273 Angiosperm View MSA
122369821 5261 Brassicaceae View MSA
123799850 5264 Brassicales-Malvales View MSA
124297331 5266 SBM View MSA
124149255 5268 Malvidae View MSA
123875097 5270 Rosid View MSA
123750682 5271 Pentapetalae View MSA
122773797 5272 Eudicot View MSA
121053383 5274 Embryophyte View MSA
123093406 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.337        
cufflinks 12.175        
cufflinks 0.192     Low  
cufflinks 6.578        
cufflinks 0.153     Low Low
cufflinks 12.98       High

0 Strain