Gene : AT1G75170 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10174//PTHR10174:SF151 - RETINALDEHYDE BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6484
Name:  ? AT1G75170 Secondary Identifier:  ? PAC:19656518
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75170 0.5kb upstream 0.5kb upstream 2589 true Chr1: 28213299-28215887 Arabidopsis thaliana
AT1G75170 0.5kb upstream 0.5kb upstream 500 false Chr1: 28213299-28213798 Arabidopsis thaliana
AT1G75170 0.5kb downstream 0.5kb downstream 2589 true Chr1: 28213799-28216387 Arabidopsis thaliana
AT1G75170 0.5kb downstream 0.5kb downstream 500 false Chr1: 28215888-28216387 Arabidopsis thaliana
AT1G75170 1.0kb upstream 1.0kb upstream 3089 true Chr1: 28212799-28215887 Arabidopsis thaliana
AT1G75170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28212799-28213798 Arabidopsis thaliana
AT1G75170 1.0kb downstream 1.0kb downstream 3089 true Chr1: 28213799-28216887 Arabidopsis thaliana
AT1G75170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28215888-28216887 Arabidopsis thaliana
AT1G75170 2.0kb upstream 2.0kb upstream 4089 true Chr1: 28211799-28215887 Arabidopsis thaliana
AT1G75170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28211799-28213798 Arabidopsis thaliana
AT1G75170 2.0kb downstream 2.0kb downstream 4089 true Chr1: 28213799-28217887 Arabidopsis thaliana
AT1G75170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28215888-28217887 Arabidopsis thaliana
AT1G75170 5.0kb upstream 5.0kb upstream 7089 true Chr1: 28208799-28215887 Arabidopsis thaliana
AT1G75170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28208799-28213798 Arabidopsis thaliana
AT1G75170 5.0kb downstream 5.0kb downstream 7089 true Chr1: 28213799-28220887 Arabidopsis thaliana
AT1G75170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28215888-28220887 Arabidopsis thaliana
AT1G75170 10.0kb upstream 10.0kb upstream 12089 true Chr1: 28203799-28215887 Arabidopsis thaliana
AT1G75170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28203799-28213798 Arabidopsis thaliana
AT1G75170 10.0kb downstream 10.0kb downstream 12089 true Chr1: 28213799-28225887 Arabidopsis thaliana
AT1G75170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28215888-28225887 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368363 5261 Brassicaceae View MSA
123833912 5264 Brassicales-Malvales View MSA
124339104 5266 SBM View MSA
124250312 5268 Malvidae View MSA
124068737 5270 Rosid View MSA
123747971 5271 Pentapetalae View MSA
122789052 5272 Eudicot View MSA
122046588 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.807        
cufflinks 3.247        
cufflinks 1.904       Low
cufflinks 4.823        
cufflinks 3.802        
cufflinks 3.592        

0 Strain