Gene : AT1G74880 A. thaliana TAIR10
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  6456
Name:  ? AT1G74880 Secondary Identifier:  ? PAC:19652874
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G74880 0.5kb upstream 0.5kb upstream 1720 true Chr1: 28129858-28131577 Arabidopsis thaliana
AT1G74880 0.5kb upstream 0.5kb upstream 500 false Chr1: 28131078-28131577 Arabidopsis thaliana
AT1G74880 0.5kb downstream 0.5kb downstream 1720 true Chr1: 28129358-28131077 Arabidopsis thaliana
AT1G74880 0.5kb downstream 0.5kb downstream 500 false Chr1: 28129358-28129857 Arabidopsis thaliana
AT1G74880 1.0kb upstream 1.0kb upstream 2220 true Chr1: 28129858-28132077 Arabidopsis thaliana
AT1G74880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28131078-28132077 Arabidopsis thaliana
AT1G74880 1.0kb downstream 1.0kb downstream 2220 true Chr1: 28128858-28131077 Arabidopsis thaliana
AT1G74880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28128858-28129857 Arabidopsis thaliana
AT1G74880 2.0kb upstream 2.0kb upstream 3220 true Chr1: 28129858-28133077 Arabidopsis thaliana
AT1G74880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28131078-28133077 Arabidopsis thaliana
AT1G74880 2.0kb downstream 2.0kb downstream 3220 true Chr1: 28127858-28131077 Arabidopsis thaliana
AT1G74880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28127858-28129857 Arabidopsis thaliana
AT1G74880 5.0kb upstream 5.0kb upstream 6220 true Chr1: 28129858-28136077 Arabidopsis thaliana
AT1G74880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28131078-28136077 Arabidopsis thaliana
AT1G74880 5.0kb downstream 5.0kb downstream 6220 true Chr1: 28124858-28131077 Arabidopsis thaliana
AT1G74880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28124858-28129857 Arabidopsis thaliana
AT1G74880 10.0kb upstream 10.0kb upstream 11220 true Chr1: 28129858-28141077 Arabidopsis thaliana
AT1G74880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28131078-28141077 Arabidopsis thaliana
AT1G74880 10.0kb downstream 10.0kb downstream 11220 true Chr1: 28119858-28131077 Arabidopsis thaliana
AT1G74880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28119858-28129857 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377754 5261 Brassicaceae View MSA
123834713 5264 Brassicales-Malvales View MSA
124344713 5266 SBM View MSA
124240180 5268 Malvidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.23     High  
cufflinks 0.558        
cufflinks 95.603     High  
cufflinks 1.066        
cufflinks 85.826     High  
cufflinks 0.579        

0 Strain