Gene : AT1G73875 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12121//PTHR12121:SF29 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // PROTEIN ANGEL Genomic Order:  6351
Name:  ? AT1G73875 Secondary Identifier:  ? PAC:19651853
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G73875 0.5kb upstream 0.5kb upstream 4415 true Chr1: 27780506-27784920 Arabidopsis thaliana
AT1G73875 0.5kb upstream 0.5kb upstream 500 false Chr1: 27780506-27781005 Arabidopsis thaliana
AT1G73875 0.5kb downstream 0.5kb downstream 4415 true Chr1: 27781006-27785420 Arabidopsis thaliana
AT1G73875 0.5kb downstream 0.5kb downstream 500 false Chr1: 27784921-27785420 Arabidopsis thaliana
AT1G73875 1.0kb upstream 1.0kb upstream 4915 true Chr1: 27780006-27784920 Arabidopsis thaliana
AT1G73875 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27780006-27781005 Arabidopsis thaliana
AT1G73875 1.0kb downstream 1.0kb downstream 4915 true Chr1: 27781006-27785920 Arabidopsis thaliana
AT1G73875 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27784921-27785920 Arabidopsis thaliana
AT1G73875 2.0kb upstream 2.0kb upstream 5915 true Chr1: 27779006-27784920 Arabidopsis thaliana
AT1G73875 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27779006-27781005 Arabidopsis thaliana
AT1G73875 2.0kb downstream 2.0kb downstream 5915 true Chr1: 27781006-27786920 Arabidopsis thaliana
AT1G73875 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27784921-27786920 Arabidopsis thaliana
AT1G73875 5.0kb upstream 5.0kb upstream 8915 true Chr1: 27776006-27784920 Arabidopsis thaliana
AT1G73875 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27776006-27781005 Arabidopsis thaliana
AT1G73875 5.0kb downstream 5.0kb downstream 8915 true Chr1: 27781006-27789920 Arabidopsis thaliana
AT1G73875 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27784921-27789920 Arabidopsis thaliana
AT1G73875 10.0kb upstream 10.0kb upstream 13915 true Chr1: 27771006-27784920 Arabidopsis thaliana
AT1G73875 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27771006-27781005 Arabidopsis thaliana
AT1G73875 10.0kb downstream 10.0kb downstream 13915 true Chr1: 27781006-27794920 Arabidopsis thaliana
AT1G73875 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27784921-27794920 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369884 5261 Brassicaceae View MSA
123833146 5264 Brassicales-Malvales View MSA
124343371 5266 SBM View MSA
124239992 5268 Malvidae View MSA
124064139 5270 Rosid View MSA
123750146 5271 Pentapetalae View MSA
122793805 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.074        
cufflinks 3.31       High
cufflinks 1.836       Low
cufflinks 3.105        
cufflinks 1.852       Low
cufflinks 2.988        

0 Strain