Gene : AT1G73580 A. thaliana TAIR10
Defline:  (1 of 3) PTHR23180//PTHR23180:SF290 - CENTAURIN/ARF // C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  6317
Name:  ? AT1G73580 Secondary Identifier:  ? PAC:19653469
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G73580 0.5kb upstream 0.5kb upstream 1178 true Chr1: 27654341-27655518 Arabidopsis thaliana
AT1G73580 0.5kb upstream 0.5kb upstream 500 false Chr1: 27654341-27654840 Arabidopsis thaliana
AT1G73580 0.5kb downstream 0.5kb downstream 1178 true Chr1: 27654841-27656018 Arabidopsis thaliana
AT1G73580 0.5kb downstream 0.5kb downstream 500 false Chr1: 27655519-27656018 Arabidopsis thaliana
AT1G73580 1.0kb upstream 1.0kb upstream 1678 true Chr1: 27653841-27655518 Arabidopsis thaliana
AT1G73580 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27653841-27654840 Arabidopsis thaliana
AT1G73580 1.0kb downstream 1.0kb downstream 1678 true Chr1: 27654841-27656518 Arabidopsis thaliana
AT1G73580 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27655519-27656518 Arabidopsis thaliana
AT1G73580 2.0kb upstream 2.0kb upstream 2678 true Chr1: 27652841-27655518 Arabidopsis thaliana
AT1G73580 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27652841-27654840 Arabidopsis thaliana
AT1G73580 2.0kb downstream 2.0kb downstream 2678 true Chr1: 27654841-27657518 Arabidopsis thaliana
AT1G73580 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27655519-27657518 Arabidopsis thaliana
AT1G73580 5.0kb upstream 5.0kb upstream 5678 true Chr1: 27649841-27655518 Arabidopsis thaliana
AT1G73580 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27649841-27654840 Arabidopsis thaliana
AT1G73580 5.0kb downstream 5.0kb downstream 5678 true Chr1: 27654841-27660518 Arabidopsis thaliana
AT1G73580 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27655519-27660518 Arabidopsis thaliana
AT1G73580 10.0kb upstream 10.0kb upstream 10678 true Chr1: 27644841-27655518 Arabidopsis thaliana
AT1G73580 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27644841-27654840 Arabidopsis thaliana
AT1G73580 10.0kb downstream 10.0kb downstream 10678 true Chr1: 27654841-27665518 Arabidopsis thaliana
AT1G73580 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27655519-27665518 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365874 5261 Brassicaceae View MSA
123799056 5264 Brassicales-Malvales View MSA
124296615 5266 SBM View MSA
124148716 5268 Malvidae View MSA
123874658 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089     Low  
cufflinks 0.334     Low  
cufflinks 0.08     Low  
cufflinks 0.503        
cufflinks 0.05     Low Low
cufflinks 1.641       High

0 Strain