Gene : BGAL17 A. thaliana TAIR10
Primary Identifier:  ? AT1G72990 Defline:  (1 of 1) PTHR23421//PTHR23421:SF13 - BETA-GALACTOSIDASE RELATED // BETA-GALACTOSIDASE
Genomic Order:  6257 Name:  ? AT1G72990
Secondary Identifier:  ? PAC:19651467
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72990 0.5kb upstream 0.5kb upstream 5627 true Chr1: 27457266-27462892 Arabidopsis thaliana
AT1G72990 0.5kb upstream 0.5kb upstream 500 false Chr1: 27462393-27462892 Arabidopsis thaliana
AT1G72990 0.5kb downstream 0.5kb downstream 5627 true Chr1: 27456766-27462392 Arabidopsis thaliana
AT1G72990 0.5kb downstream 0.5kb downstream 500 false Chr1: 27456766-27457265 Arabidopsis thaliana
AT1G72990 1.0kb upstream 1.0kb upstream 6127 true Chr1: 27457266-27463392 Arabidopsis thaliana
AT1G72990 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27462393-27463392 Arabidopsis thaliana
AT1G72990 1.0kb downstream 1.0kb downstream 6127 true Chr1: 27456266-27462392 Arabidopsis thaliana
AT1G72990 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27456266-27457265 Arabidopsis thaliana
AT1G72990 2.0kb upstream 2.0kb upstream 7127 true Chr1: 27457266-27464392 Arabidopsis thaliana
AT1G72990 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27462393-27464392 Arabidopsis thaliana
AT1G72990 2.0kb downstream 2.0kb downstream 7127 true Chr1: 27455266-27462392 Arabidopsis thaliana
AT1G72990 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27455266-27457265 Arabidopsis thaliana
AT1G72990 5.0kb upstream 5.0kb upstream 10127 true Chr1: 27457266-27467392 Arabidopsis thaliana
AT1G72990 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27462393-27467392 Arabidopsis thaliana
AT1G72990 5.0kb downstream 5.0kb downstream 10127 true Chr1: 27452266-27462392 Arabidopsis thaliana
AT1G72990 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27452266-27457265 Arabidopsis thaliana
AT1G72990 10.0kb upstream 10.0kb upstream 15127 true Chr1: 27457266-27472392 Arabidopsis thaliana
AT1G72990 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27462393-27472392 Arabidopsis thaliana
AT1G72990 10.0kb downstream 10.0kb downstream 15127 true Chr1: 27447266-27462392 Arabidopsis thaliana
AT1G72990 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27447266-27457265 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373852 5261 Brassicaceae View MSA
123836563 5264 Brassicales-Malvales View MSA
124345223 5266 SBM View MSA
124238494 5268 Malvidae View MSA
124062395 5270 Rosid View MSA
123738318 5271 Pentapetalae View MSA
122790635 5272 Eudicot View MSA
122047626 5273 Angiosperm View MSA
121345456 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.118       Low
cufflinks 2.521        
cufflinks 1.392        
cufflinks 2.906       High
cufflinks 1.355        
cufflinks 2.309        

0 Strain