Gene : AT1G72420 A. thaliana TAIR10
Defline:  (1 of 2) K18159 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1 (NDUFAF1, CIA30) Genomic Order:  6200
Name:  ? AT1G72420 Secondary Identifier:  ? PAC:19653350
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72420 0.5kb upstream 0.5kb upstream 2976 true Chr1: 27261194-27264169 Arabidopsis thaliana
AT1G72420 0.5kb upstream 0.5kb upstream 500 false Chr1: 27263670-27264169 Arabidopsis thaliana
AT1G72420 0.5kb downstream 0.5kb downstream 2976 true Chr1: 27260694-27263669 Arabidopsis thaliana
AT1G72420 0.5kb downstream 0.5kb downstream 500 false Chr1: 27260694-27261193 Arabidopsis thaliana
AT1G72420 1.0kb upstream 1.0kb upstream 3476 true Chr1: 27261194-27264669 Arabidopsis thaliana
AT1G72420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27263670-27264669 Arabidopsis thaliana
AT1G72420 1.0kb downstream 1.0kb downstream 3476 true Chr1: 27260194-27263669 Arabidopsis thaliana
AT1G72420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27260194-27261193 Arabidopsis thaliana
AT1G72420 2.0kb upstream 2.0kb upstream 4476 true Chr1: 27261194-27265669 Arabidopsis thaliana
AT1G72420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27263670-27265669 Arabidopsis thaliana
AT1G72420 2.0kb downstream 2.0kb downstream 4476 true Chr1: 27259194-27263669 Arabidopsis thaliana
AT1G72420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27259194-27261193 Arabidopsis thaliana
AT1G72420 5.0kb upstream 5.0kb upstream 7476 true Chr1: 27261194-27268669 Arabidopsis thaliana
AT1G72420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27263670-27268669 Arabidopsis thaliana
AT1G72420 5.0kb downstream 5.0kb downstream 7476 true Chr1: 27256194-27263669 Arabidopsis thaliana
AT1G72420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27256194-27261193 Arabidopsis thaliana
AT1G72420 10.0kb upstream 10.0kb upstream 12476 true Chr1: 27261194-27273669 Arabidopsis thaliana
AT1G72420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27263670-27273669 Arabidopsis thaliana
AT1G72420 10.0kb downstream 10.0kb downstream 12476 true Chr1: 27251194-27263669 Arabidopsis thaliana
AT1G72420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27251194-27261193 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378085 5261 Brassicaceae View MSA
123828854 5264 Brassicales-Malvales View MSA
124341468 5266 SBM View MSA
124239795 5268 Malvidae View MSA
124068389 5270 Rosid View MSA
123739238 5271 Pentapetalae View MSA
122786163 5272 Eudicot View MSA
122042406 5273 Angiosperm View MSA
121347727 5274 Embryophyte View MSA
123425105 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.475       High
cufflinks 2.94        
cufflinks 2.322        
cufflinks 3.125        
cufflinks 2.11       Low
cufflinks 3.078        

0 Strain