Gene : AT1G72416 A. thaliana TAIR10
Defline:  (1 of 5) PTHR24078//PTHR24078:SF231 - DNAJ HOMOLOG SUBFAMILY C MEMBER // CHAPERONE PROTEIN DNAJ Genomic Order:  6199
Name:  ? AT1G72416 Secondary Identifier:  ? PAC:19655572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72416 0.5kb upstream 0.5kb upstream 1963 true Chr1: 27258829-27260791 Arabidopsis thaliana
AT1G72416 0.5kb upstream 0.5kb upstream 500 false Chr1: 27260292-27260791 Arabidopsis thaliana
AT1G72416 0.5kb downstream 0.5kb downstream 1963 true Chr1: 27258329-27260291 Arabidopsis thaliana
AT1G72416 0.5kb downstream 0.5kb downstream 500 false Chr1: 27258329-27258828 Arabidopsis thaliana
AT1G72416 1.0kb upstream 1.0kb upstream 2463 true Chr1: 27258829-27261291 Arabidopsis thaliana
AT1G72416 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27260292-27261291 Arabidopsis thaliana
AT1G72416 1.0kb downstream 1.0kb downstream 2463 true Chr1: 27257829-27260291 Arabidopsis thaliana
AT1G72416 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27257829-27258828 Arabidopsis thaliana
AT1G72416 2.0kb upstream 2.0kb upstream 3463 true Chr1: 27258829-27262291 Arabidopsis thaliana
AT1G72416 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27260292-27262291 Arabidopsis thaliana
AT1G72416 2.0kb downstream 2.0kb downstream 3463 true Chr1: 27256829-27260291 Arabidopsis thaliana
AT1G72416 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27256829-27258828 Arabidopsis thaliana
AT1G72416 5.0kb upstream 5.0kb upstream 6463 true Chr1: 27258829-27265291 Arabidopsis thaliana
AT1G72416 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27260292-27265291 Arabidopsis thaliana
AT1G72416 5.0kb downstream 5.0kb downstream 6463 true Chr1: 27253829-27260291 Arabidopsis thaliana
AT1G72416 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27253829-27258828 Arabidopsis thaliana
AT1G72416 10.0kb upstream 10.0kb upstream 11463 true Chr1: 27258829-27270291 Arabidopsis thaliana
AT1G72416 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27260292-27270291 Arabidopsis thaliana
AT1G72416 10.0kb downstream 10.0kb downstream 11463 true Chr1: 27248829-27260291 Arabidopsis thaliana
AT1G72416 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27248829-27258828 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365365 5261 Brassicaceae View MSA
123837825 5264 Brassicales-Malvales View MSA
124349771 5266 SBM View MSA
124250078 5268 Malvidae View MSA
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.884        
cufflinks 2.858        
cufflinks 6.148        
cufflinks 4.929        
cufflinks 8.239       High
cufflinks 1.702       Low

0 Strain