Gene : AT1G72550 A. thaliana TAIR10
Defline:  (1 of 1) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT) Genomic Order:  6213
Name:  ? AT1G72550 Secondary Identifier:  ? PAC:19649851
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72550 0.5kb upstream 0.5kb upstream 4850 true Chr1: 27319688-27324537 Arabidopsis thaliana
AT1G72550 0.5kb upstream 0.5kb upstream 500 false Chr1: 27324038-27324537 Arabidopsis thaliana
AT1G72550 0.5kb downstream 0.5kb downstream 4850 true Chr1: 27319188-27324037 Arabidopsis thaliana
AT1G72550 0.5kb downstream 0.5kb downstream 500 false Chr1: 27319188-27319687 Arabidopsis thaliana
AT1G72550 1.0kb upstream 1.0kb upstream 5350 true Chr1: 27319688-27325037 Arabidopsis thaliana
AT1G72550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27324038-27325037 Arabidopsis thaliana
AT1G72550 1.0kb downstream 1.0kb downstream 5350 true Chr1: 27318688-27324037 Arabidopsis thaliana
AT1G72550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27318688-27319687 Arabidopsis thaliana
AT1G72550 2.0kb upstream 2.0kb upstream 6350 true Chr1: 27319688-27326037 Arabidopsis thaliana
AT1G72550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27324038-27326037 Arabidopsis thaliana
AT1G72550 2.0kb downstream 2.0kb downstream 6350 true Chr1: 27317688-27324037 Arabidopsis thaliana
AT1G72550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27317688-27319687 Arabidopsis thaliana
AT1G72550 5.0kb upstream 5.0kb upstream 9350 true Chr1: 27319688-27329037 Arabidopsis thaliana
AT1G72550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27324038-27329037 Arabidopsis thaliana
AT1G72550 5.0kb downstream 5.0kb downstream 9350 true Chr1: 27314688-27324037 Arabidopsis thaliana
AT1G72550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27314688-27319687 Arabidopsis thaliana
AT1G72550 10.0kb upstream 10.0kb upstream 14350 true Chr1: 27319688-27334037 Arabidopsis thaliana
AT1G72550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27324038-27334037 Arabidopsis thaliana
AT1G72550 10.0kb downstream 10.0kb downstream 14350 true Chr1: 27309688-27324037 Arabidopsis thaliana
AT1G72550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27309688-27319687 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361573 5261 Brassicaceae View MSA
123834957 5264 Brassicales-Malvales View MSA
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.127        
cufflinks 8.336        
cufflinks 6.627        
cufflinks 9.653       High
cufflinks 6.13       Low
cufflinks 9.335        

0 Strain