Gene : P40 A. thaliana TAIR10
Primary Identifier:  ? AT1G72370 Defline:  (1 of 2) K02998 - small subunit ribosomal protein SAe (RP-SAe, RPSA)
Genomic Order:  6196 Name:  ? AT1G72370
Secondary Identifier:  ? PAC:19657536
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72370 0.5kb upstream 0.5kb upstream 2489 true Chr1: 27242943-27245431 Arabidopsis thaliana
AT1G72370 0.5kb upstream 0.5kb upstream 500 false Chr1: 27244932-27245431 Arabidopsis thaliana
AT1G72370 0.5kb downstream 0.5kb downstream 2489 true Chr1: 27242443-27244931 Arabidopsis thaliana
AT1G72370 0.5kb downstream 0.5kb downstream 500 false Chr1: 27242443-27242942 Arabidopsis thaliana
AT1G72370 1.0kb upstream 1.0kb upstream 2989 true Chr1: 27242943-27245931 Arabidopsis thaliana
AT1G72370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27244932-27245931 Arabidopsis thaliana
AT1G72370 1.0kb downstream 1.0kb downstream 2989 true Chr1: 27241943-27244931 Arabidopsis thaliana
AT1G72370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27241943-27242942 Arabidopsis thaliana
AT1G72370 2.0kb upstream 2.0kb upstream 3989 true Chr1: 27242943-27246931 Arabidopsis thaliana
AT1G72370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27244932-27246931 Arabidopsis thaliana
AT1G72370 2.0kb downstream 2.0kb downstream 3989 true Chr1: 27240943-27244931 Arabidopsis thaliana
AT1G72370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27240943-27242942 Arabidopsis thaliana
AT1G72370 5.0kb upstream 5.0kb upstream 6989 true Chr1: 27242943-27249931 Arabidopsis thaliana
AT1G72370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27244932-27249931 Arabidopsis thaliana
AT1G72370 5.0kb downstream 5.0kb downstream 6989 true Chr1: 27237943-27244931 Arabidopsis thaliana
AT1G72370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27237943-27242942 Arabidopsis thaliana
AT1G72370 10.0kb upstream 10.0kb upstream 11989 true Chr1: 27242943-27254931 Arabidopsis thaliana
AT1G72370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27244932-27254931 Arabidopsis thaliana
AT1G72370 10.0kb downstream 10.0kb downstream 11989 true Chr1: 27232943-27244931 Arabidopsis thaliana
AT1G72370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27232943-27242942 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381060 5261 Brassicaceae View MSA
123829633 5264 Brassicales-Malvales View MSA
124337080 5266 SBM View MSA
124251784 5268 Malvidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.261     High  
cufflinks 129.145     High  
cufflinks 84.676     High  
cufflinks 138.251     High  
cufflinks 71.834     High Low
cufflinks 167.545     High High

0 Strain