Gene : ALAAT2 A. thaliana TAIR10
Primary Identifier:  ? AT1G72330 Defline:  (1 of 2) K00814 - alanine transaminase (GPT, ALT)
Genomic Order:  6192 Name:  ? AT1G72330
Secondary Identifier:  ? PAC:19649564
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ALANINE-DEG3-PWY Arabidopsis thaliana pathologic  
Athaliana ALANINE-SYN2-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72330 0.5kb upstream 0.5kb upstream 3815 true Chr1: 27232975-27236789 Arabidopsis thaliana
AT1G72330 0.5kb upstream 0.5kb upstream 500 false Chr1: 27232975-27233474 Arabidopsis thaliana
AT1G72330 0.5kb downstream 0.5kb downstream 3815 true Chr1: 27233475-27237289 Arabidopsis thaliana
AT1G72330 0.5kb downstream 0.5kb downstream 500 false Chr1: 27236790-27237289 Arabidopsis thaliana
AT1G72330 1.0kb upstream 1.0kb upstream 4315 true Chr1: 27232475-27236789 Arabidopsis thaliana
AT1G72330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27232475-27233474 Arabidopsis thaliana
AT1G72330 1.0kb downstream 1.0kb downstream 4315 true Chr1: 27233475-27237789 Arabidopsis thaliana
AT1G72330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27236790-27237789 Arabidopsis thaliana
AT1G72330 2.0kb upstream 2.0kb upstream 5315 true Chr1: 27231475-27236789 Arabidopsis thaliana
AT1G72330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27231475-27233474 Arabidopsis thaliana
AT1G72330 2.0kb downstream 2.0kb downstream 5315 true Chr1: 27233475-27238789 Arabidopsis thaliana
AT1G72330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27236790-27238789 Arabidopsis thaliana
AT1G72330 5.0kb upstream 5.0kb upstream 8315 true Chr1: 27228475-27236789 Arabidopsis thaliana
AT1G72330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27228475-27233474 Arabidopsis thaliana
AT1G72330 5.0kb downstream 5.0kb downstream 8315 true Chr1: 27233475-27241789 Arabidopsis thaliana
AT1G72330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27236790-27241789 Arabidopsis thaliana
AT1G72330 10.0kb upstream 10.0kb upstream 13315 true Chr1: 27223475-27236789 Arabidopsis thaliana
AT1G72330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27223475-27233474 Arabidopsis thaliana
AT1G72330 10.0kb downstream 10.0kb downstream 13315 true Chr1: 27233475-27246789 Arabidopsis thaliana
AT1G72330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27236790-27246789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375790 5261 Brassicaceae View MSA
123836852 5264 Brassicales-Malvales View MSA
124344699 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.706        
cufflinks 1.118        
cufflinks 3.374        
cufflinks 1.397        
cufflinks 4.014       High
cufflinks 0.867       Low

0 Strain