Gene : ATL3 A. thaliana TAIR10
Primary Identifier:  ? AT1G72310 Defline:  (1 of 2) PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3
Genomic Order:  6190 Name:  ? AT1G72310
Secondary Identifier:  ? PAC:19657639
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72310 0.5kb upstream 0.5kb upstream 2149 true Chr1: 27225397-27227545 Arabidopsis thaliana
AT1G72310 0.5kb upstream 0.5kb upstream 500 false Chr1: 27225397-27225896 Arabidopsis thaliana
AT1G72310 0.5kb downstream 0.5kb downstream 2149 true Chr1: 27225897-27228045 Arabidopsis thaliana
AT1G72310 0.5kb downstream 0.5kb downstream 500 false Chr1: 27227546-27228045 Arabidopsis thaliana
AT1G72310 1.0kb upstream 1.0kb upstream 2649 true Chr1: 27224897-27227545 Arabidopsis thaliana
AT1G72310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27224897-27225896 Arabidopsis thaliana
AT1G72310 1.0kb downstream 1.0kb downstream 2649 true Chr1: 27225897-27228545 Arabidopsis thaliana
AT1G72310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27227546-27228545 Arabidopsis thaliana
AT1G72310 2.0kb upstream 2.0kb upstream 3649 true Chr1: 27223897-27227545 Arabidopsis thaliana
AT1G72310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27223897-27225896 Arabidopsis thaliana
AT1G72310 2.0kb downstream 2.0kb downstream 3649 true Chr1: 27225897-27229545 Arabidopsis thaliana
AT1G72310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27227546-27229545 Arabidopsis thaliana
AT1G72310 5.0kb upstream 5.0kb upstream 6649 true Chr1: 27220897-27227545 Arabidopsis thaliana
AT1G72310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27220897-27225896 Arabidopsis thaliana
AT1G72310 5.0kb downstream 5.0kb downstream 6649 true Chr1: 27225897-27232545 Arabidopsis thaliana
AT1G72310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27227546-27232545 Arabidopsis thaliana
AT1G72310 10.0kb upstream 10.0kb upstream 11649 true Chr1: 27215897-27227545 Arabidopsis thaliana
AT1G72310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27215897-27225896 Arabidopsis thaliana
AT1G72310 10.0kb downstream 10.0kb downstream 11649 true Chr1: 27225897-27237545 Arabidopsis thaliana
AT1G72310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27227546-27237545 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380682 5261 Brassicaceae View MSA
123838599 5264 Brassicales-Malvales View MSA
124337079 5266 SBM View MSA
124239102 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.347        
cufflinks 18.652        
cufflinks 5.854        
cufflinks 20.993        
cufflinks 5.105       Low
cufflinks 22.391       High

0 Strain