Gene : AT1G72160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23324:SF48 - PATELLIN-3-RELATED Genomic Order:  6174
Name:  ? AT1G72160 Secondary Identifier:  ? PAC:19651539
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72160 0.5kb upstream 0.5kb upstream 2584 true Chr1: 27153581-27156164 Arabidopsis thaliana
AT1G72160 0.5kb upstream 0.5kb upstream 500 false Chr1: 27155665-27156164 Arabidopsis thaliana
AT1G72160 0.5kb downstream 0.5kb downstream 2584 true Chr1: 27153081-27155664 Arabidopsis thaliana
AT1G72160 0.5kb downstream 0.5kb downstream 500 false Chr1: 27153081-27153580 Arabidopsis thaliana
AT1G72160 1.0kb upstream 1.0kb upstream 3084 true Chr1: 27153581-27156664 Arabidopsis thaliana
AT1G72160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27155665-27156664 Arabidopsis thaliana
AT1G72160 1.0kb downstream 1.0kb downstream 3084 true Chr1: 27152581-27155664 Arabidopsis thaliana
AT1G72160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27152581-27153580 Arabidopsis thaliana
AT1G72160 2.0kb upstream 2.0kb upstream 4084 true Chr1: 27153581-27157664 Arabidopsis thaliana
AT1G72160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27155665-27157664 Arabidopsis thaliana
AT1G72160 2.0kb downstream 2.0kb downstream 4084 true Chr1: 27151581-27155664 Arabidopsis thaliana
AT1G72160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27151581-27153580 Arabidopsis thaliana
AT1G72160 5.0kb upstream 5.0kb upstream 7084 true Chr1: 27153581-27160664 Arabidopsis thaliana
AT1G72160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27155665-27160664 Arabidopsis thaliana
AT1G72160 5.0kb downstream 5.0kb downstream 7084 true Chr1: 27148581-27155664 Arabidopsis thaliana
AT1G72160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27148581-27153580 Arabidopsis thaliana
AT1G72160 10.0kb upstream 10.0kb upstream 12084 true Chr1: 27153581-27165664 Arabidopsis thaliana
AT1G72160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27155665-27165664 Arabidopsis thaliana
AT1G72160 10.0kb downstream 10.0kb downstream 12084 true Chr1: 27143581-27155664 Arabidopsis thaliana
AT1G72160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27143581-27153580 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360557 5261 Brassicaceae View MSA
123827804 5264 Brassicales-Malvales View MSA
124350649 5266 SBM View MSA
124253290 5268 Malvidae View MSA
124069851 5270 Rosid View MSA
123749558 5271 Pentapetalae View MSA
122796481 5272 Eudicot View MSA
122048382 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350193 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.463     High  
cufflinks 53.709     High  
cufflinks 50.463     High Low
cufflinks 56.786     High  
cufflinks 51.518     High  
cufflinks 65.434     High High

0 Strain