Gene : PATL1 A. thaliana TAIR10
Primary Identifier:  ? AT1G72150 Defline:  (1 of 2) PTHR23324//PTHR23324:SF67 - SEC14 RELATED PROTEIN // PATELLIN-1-RELATED
Genomic Order:  6173 Name:  ? AT1G72150
Secondary Identifier:  ? PAC:19650784
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72150 0.5kb upstream 0.5kb upstream 3021 true Chr1: 27147960-27150980 Arabidopsis thaliana
AT1G72150 0.5kb upstream 0.5kb upstream 500 false Chr1: 27147960-27148459 Arabidopsis thaliana
AT1G72150 0.5kb downstream 0.5kb downstream 3021 true Chr1: 27148460-27151480 Arabidopsis thaliana
AT1G72150 0.5kb downstream 0.5kb downstream 500 false Chr1: 27150981-27151480 Arabidopsis thaliana
AT1G72150 1.0kb upstream 1.0kb upstream 3521 true Chr1: 27147460-27150980 Arabidopsis thaliana
AT1G72150 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27147460-27148459 Arabidopsis thaliana
AT1G72150 1.0kb downstream 1.0kb downstream 3521 true Chr1: 27148460-27151980 Arabidopsis thaliana
AT1G72150 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27150981-27151980 Arabidopsis thaliana
AT1G72150 2.0kb upstream 2.0kb upstream 4521 true Chr1: 27146460-27150980 Arabidopsis thaliana
AT1G72150 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27146460-27148459 Arabidopsis thaliana
AT1G72150 2.0kb downstream 2.0kb downstream 4521 true Chr1: 27148460-27152980 Arabidopsis thaliana
AT1G72150 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27150981-27152980 Arabidopsis thaliana
AT1G72150 5.0kb upstream 5.0kb upstream 7521 true Chr1: 27143460-27150980 Arabidopsis thaliana
AT1G72150 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27143460-27148459 Arabidopsis thaliana
AT1G72150 5.0kb downstream 5.0kb downstream 7521 true Chr1: 27148460-27155980 Arabidopsis thaliana
AT1G72150 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27150981-27155980 Arabidopsis thaliana
AT1G72150 10.0kb upstream 10.0kb upstream 12521 true Chr1: 27138460-27150980 Arabidopsis thaliana
AT1G72150 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27138460-27148459 Arabidopsis thaliana
AT1G72150 10.0kb downstream 10.0kb downstream 12521 true Chr1: 27148460-27160980 Arabidopsis thaliana
AT1G72150 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27150981-27160980 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370785 5261 Brassicaceae View MSA
123837677 5264 Brassicales-Malvales View MSA
124345949 5266 SBM View MSA
124253290 5268 Malvidae View MSA
124069851 5270 Rosid View MSA
123749558 5271 Pentapetalae View MSA
122796481 5272 Eudicot View MSA
122048382 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350193 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 437.511     High High
cufflinks 204.506     High Low
cufflinks 283.322     High  
cufflinks 234.546     High  
cufflinks 358.762     High  
cufflinks 271.144     High  

0 Strain