Gene : SUC1 A. thaliana TAIR10
Primary Identifier:  ? AT1G71880 Defline:  (1 of 9) K15378 - solute carrier family 45, member 1/2/4 (SLC45A1_2_4)
Genomic Order:  6144 Name:  ? AT1G71880
Secondary Identifier:  ? PAC:19655696
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71880 0.5kb upstream 0.5kb upstream 2662 true Chr1: 27053680-27056341 Arabidopsis thaliana
AT1G71880 0.5kb upstream 0.5kb upstream 500 false Chr1: 27053680-27054179 Arabidopsis thaliana
AT1G71880 0.5kb downstream 0.5kb downstream 2662 true Chr1: 27054180-27056841 Arabidopsis thaliana
AT1G71880 0.5kb downstream 0.5kb downstream 500 false Chr1: 27056342-27056841 Arabidopsis thaliana
AT1G71880 1.0kb upstream 1.0kb upstream 3162 true Chr1: 27053180-27056341 Arabidopsis thaliana
AT1G71880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27053180-27054179 Arabidopsis thaliana
AT1G71880 1.0kb downstream 1.0kb downstream 3162 true Chr1: 27054180-27057341 Arabidopsis thaliana
AT1G71880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27056342-27057341 Arabidopsis thaliana
AT1G71880 2.0kb upstream 2.0kb upstream 4162 true Chr1: 27052180-27056341 Arabidopsis thaliana
AT1G71880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27052180-27054179 Arabidopsis thaliana
AT1G71880 2.0kb downstream 2.0kb downstream 4162 true Chr1: 27054180-27058341 Arabidopsis thaliana
AT1G71880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27056342-27058341 Arabidopsis thaliana
AT1G71880 5.0kb upstream 5.0kb upstream 7162 true Chr1: 27049180-27056341 Arabidopsis thaliana
AT1G71880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27049180-27054179 Arabidopsis thaliana
AT1G71880 5.0kb downstream 5.0kb downstream 7162 true Chr1: 27054180-27061341 Arabidopsis thaliana
AT1G71880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27056342-27061341 Arabidopsis thaliana
AT1G71880 10.0kb upstream 10.0kb upstream 12162 true Chr1: 27044180-27056341 Arabidopsis thaliana
AT1G71880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27044180-27054179 Arabidopsis thaliana
AT1G71880 10.0kb downstream 10.0kb downstream 12162 true Chr1: 27054180-27066341 Arabidopsis thaliana
AT1G71880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27056342-27066341 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360343 5261 Brassicaceae View MSA
123838018 5264 Brassicales-Malvales View MSA
124343381 5266 SBM View MSA
124251923 5268 Malvidae View MSA
124066357 5270 Rosid View MSA
123752867 5271 Pentapetalae View MSA
122774831 5272 Eudicot View MSA
122050885 5273 Angiosperm View MSA
121349366 5274 Embryophyte View MSA
123381287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.873     High  
cufflinks 74.324     High  
cufflinks 16.615       Low
cufflinks 79.449     High  
cufflinks 28.53     High  
cufflinks 68.135     High  

0 Strain