Gene : AT1G72120 A. thaliana TAIR10
Defline:  (1 of 7) PTHR11654//PTHR11654:SF94 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  6168
Name:  ? AT1G72120 Secondary Identifier:  ? PAC:19650053
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72120 0.5kb upstream 0.5kb upstream 2389 true Chr1: 27131597-27133985 Arabidopsis thaliana
AT1G72120 0.5kb upstream 0.5kb upstream 500 false Chr1: 27131597-27132096 Arabidopsis thaliana
AT1G72120 0.5kb downstream 0.5kb downstream 2389 true Chr1: 27132097-27134485 Arabidopsis thaliana
AT1G72120 0.5kb downstream 0.5kb downstream 500 false Chr1: 27133986-27134485 Arabidopsis thaliana
AT1G72120 1.0kb upstream 1.0kb upstream 2889 true Chr1: 27131097-27133985 Arabidopsis thaliana
AT1G72120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27131097-27132096 Arabidopsis thaliana
AT1G72120 1.0kb downstream 1.0kb downstream 2889 true Chr1: 27132097-27134985 Arabidopsis thaliana
AT1G72120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27133986-27134985 Arabidopsis thaliana
AT1G72120 2.0kb upstream 2.0kb upstream 3889 true Chr1: 27130097-27133985 Arabidopsis thaliana
AT1G72120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27130097-27132096 Arabidopsis thaliana
AT1G72120 2.0kb downstream 2.0kb downstream 3889 true Chr1: 27132097-27135985 Arabidopsis thaliana
AT1G72120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27133986-27135985 Arabidopsis thaliana
AT1G72120 5.0kb upstream 5.0kb upstream 6889 true Chr1: 27127097-27133985 Arabidopsis thaliana
AT1G72120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27127097-27132096 Arabidopsis thaliana
AT1G72120 5.0kb downstream 5.0kb downstream 6889 true Chr1: 27132097-27138985 Arabidopsis thaliana
AT1G72120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27133986-27138985 Arabidopsis thaliana
AT1G72120 10.0kb upstream 10.0kb upstream 11889 true Chr1: 27122097-27133985 Arabidopsis thaliana
AT1G72120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27122097-27132096 Arabidopsis thaliana
AT1G72120 10.0kb downstream 10.0kb downstream 11889 true Chr1: 27132097-27143985 Arabidopsis thaliana
AT1G72120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27133986-27143985 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365778 5261 Brassicaceae View MSA
123837772 5264 Brassicales-Malvales View MSA
124349653 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.758        
cufflinks 12.254        
cufflinks 2.646       Low
cufflinks 13.606       High
cufflinks 5.643        
cufflinks 10.074        

0 Strain