Gene : AT1G71370 A. thaliana TAIR10
Defline:  (1 of 3) K14809 - ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13] (DDX55, SPB4) Genomic Order:  6102
Name:  ? AT1G71370 Secondary Identifier:  ? PAC:19654340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71370 0.5kb upstream 0.5kb upstream 2930 true Chr1: 26897005-26899934 Arabidopsis thaliana
AT1G71370 0.5kb upstream 0.5kb upstream 500 false Chr1: 26899435-26899934 Arabidopsis thaliana
AT1G71370 0.5kb downstream 0.5kb downstream 2930 true Chr1: 26896505-26899434 Arabidopsis thaliana
AT1G71370 0.5kb downstream 0.5kb downstream 500 false Chr1: 26896505-26897004 Arabidopsis thaliana
AT1G71370 1.0kb upstream 1.0kb upstream 3430 true Chr1: 26897005-26900434 Arabidopsis thaliana
AT1G71370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26899435-26900434 Arabidopsis thaliana
AT1G71370 1.0kb downstream 1.0kb downstream 3430 true Chr1: 26896005-26899434 Arabidopsis thaliana
AT1G71370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26896005-26897004 Arabidopsis thaliana
AT1G71370 2.0kb upstream 2.0kb upstream 4430 true Chr1: 26897005-26901434 Arabidopsis thaliana
AT1G71370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26899435-26901434 Arabidopsis thaliana
AT1G71370 2.0kb downstream 2.0kb downstream 4430 true Chr1: 26895005-26899434 Arabidopsis thaliana
AT1G71370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26895005-26897004 Arabidopsis thaliana
AT1G71370 5.0kb upstream 5.0kb upstream 7430 true Chr1: 26897005-26904434 Arabidopsis thaliana
AT1G71370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26899435-26904434 Arabidopsis thaliana
AT1G71370 5.0kb downstream 5.0kb downstream 7430 true Chr1: 26892005-26899434 Arabidopsis thaliana
AT1G71370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26892005-26897004 Arabidopsis thaliana
AT1G71370 10.0kb upstream 10.0kb upstream 12430 true Chr1: 26897005-26909434 Arabidopsis thaliana
AT1G71370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26899435-26909434 Arabidopsis thaliana
AT1G71370 10.0kb downstream 10.0kb downstream 12430 true Chr1: 26887005-26899434 Arabidopsis thaliana
AT1G71370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26887005-26897004 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657926 5273 Angiosperm View MSA
122381778 5261 Brassicaceae View MSA
123803438 5264 Brassicales-Malvales View MSA
124300549 5266 SBM View MSA
124151713 5268 Malvidae View MSA
124040543 5270 Rosid View MSA
123611886 5271 Pentapetalae View MSA
122646428 5272 Eudicot View MSA
123429160 5275 Viridiplantae View MSA
120929949 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.011     Low  
cufflinks 0.013     Low  

0 Strain